RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 OBP2BQ9NPH6 170 aa16.64■□□□□ 0.25
TMEM53-201ENST00000372235 INTS9Q9NV88 658 aaKnown RBP16.64■□□□□ 0.25
TMEM53-201ENST00000372235 TRIM33Q9UPN9 1127 aa16.64■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF469Q96JG9 3925 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-201ENST00000372235 SERPINB7O75635 380 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 KRT33AO76009 404 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 AHSA1O95433 338 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 IGHV3-9P01782 118 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 BMP4P12644 408 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 HOXB4P17483 251 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-201ENST00000372235 CDH11P55287 796 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 GABRA6Q16445 453 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 NRF1Q16656 503 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 GCNT6Q5T4J0 391 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 C1orf140Q5VVS0 124 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 GPAT4Q86UL3 456 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 CLIP4Q8N3C7 705 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 KBTBD8Q8NFY9 601 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 OR9K2Q8NGE7 335 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 MFSD8Q8NHS3 518 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 DNAJA4Q8WW22 397 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-201ENST00000372235 BOD1Q96IK1 185 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF317Q96PQ6 595 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-201ENST00000372235 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 FKRPQ9H9S5 495 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 SELENONQ9NZV5 590 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 POU2F3Q9UKI9 436 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 SLC25A15Q9Y619 301 aa16.63■□□□□ 0.25
TMEM53-201ENST00000372235 ZC3H12DA2A288 527 aaKnown RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 ELOA3DA6NLF2 546 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 PDLIM1O00151 329 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 NR5A2O00482 541 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 AKR7A3O95154 331 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 VIMP08670 466 aaKnown RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 PNMTP11086 282 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 SLC6A2P23975 617 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 EDNRAP25101 427 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 PRPS1P60891 318 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 ELOA3BQ3SY89 546 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 RPS26P11Q5JNZ5 115 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 SLC22A25Q6T423 547 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 NET1Q7Z628 596 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 DTX2Q86UW9 622 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 TMEM99Q8N816 258 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 LSMEM1Q8N8F7 131 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 ELOA3Q8NG57 546 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 OR52N5Q8NH56 324 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 C3orf49Q96BT1 292 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 DNAJA3Q96EY1 480 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 ADAD1Q96M93 576 aaKnown RBP16.62■□□□□ 0.25
TMEM53-201ENST00000372235 TMEM38AQ9H6F2 299 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 ADPRHL2Q9NX46 363 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 SLC13A4Q9UKG4 626 aa16.62■□□□□ 0.25
TMEM53-201ENST00000372235 FREM1Q5H8C1 2179 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 ARID1AO14497 2285 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 SHISA9B4DS77 424 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 FRS3O43559 492 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 RAMP1O60894 148 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 NPIPB7O75200 414 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 SOD3P08294 240 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 ITGA5P08648 1049 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 ARAFP10398 606 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 CD40P25942 277 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 NCALDP61601 193 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 CDK6Q00534 326 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 MFSD13AQ14CX5 517 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 CLEC12BQ2HXU8 276 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 DHRS4L2Q6PKH6 230 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 C6orf89Q6UWU4 347 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 ATG4DQ86TL0 474 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-201ENST00000372235 SERPINA11Q86U17 422 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 FUNDC1Q8IVP5 155 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 MAGEB18Q96M61 343 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 HS6ST2Q96MM7 605 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 EBF4Q9BQW3 602 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 SLC7A10Q9NS82 523 aa16.61■□□□□ 0.25
TMEM53-201ENST00000372235 TMEM229AB2RXF0 380 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF587BE7ETH6 402 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
TMEM53-201ENST00000372235 HOXB9P17482 250 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-201ENST00000372235 GPX2P18283 190 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 NTF4P34130 210 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 PPP2R2BQ00005 443 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 AGKQ53H12 422 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 TSPO2Q5TGU0 170 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 ZNF544Q6NX49 715 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 FBXL14Q8N1E6 418 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 ANKK1Q8NFD2 765 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 OR52E4Q8NGH9 312 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 TSPEARQ8WU66 669 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 SLC38A4Q969I6 547 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 MAL2Q969L2 176 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 SMR3AQ99954 134 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 DHRS9Q9BPW9 319 aa16.6■□□□□ 0.25
TMEM53-201ENST00000372235 TRAF4Q9BUZ4 470 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms