RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IL32P24001 234 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 LCN1P31025 176 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 LSSP48449 732 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ARL4DP49703 201 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF81P51508 661 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 FUT5Q11128 374 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 POU4F3Q15319 338 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 MAPK14Q16539 360 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ELFN2Q5R3F8 820 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 SLC30A6Q6NXT4 461 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 NIPAL3Q6P499 406 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 KRT74Q7RTS7 529 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 TMPRSS7Q7RTY8 843 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 C16orf62Q7Z3J2 963 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 SIAH3Q8IW03 269 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 RNF113BQ8IZP6 322 aaKnown RBP10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ANKRD53Q8N9V6 530 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 OR5D16Q8NGK9 328 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 OR2A1Q8NGT9 310 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 FLVCR1-AS1Q8TAF5 88 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 NDC1Q9BTX1 674 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 HINT3Q9NQE9 182 aaKnown RBP10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF224Q9NZL3 707 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 SESN1Q9Y6P5 492 aa10.53□□□□□ -0.72
TSPAN1-201ENST00000372003 A0A1W2PPL8 197 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 DAPL1A0PJW8 107 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 TLCD2A6NGC4 264 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC22A31A6NKX4 558 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 M0R233 179 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 PRICKLE3O43900 615 aaPredicted RBP10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 PEX14O75381 377 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 TSPAN9O75954 239 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 TPPPO94811 219 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 MPC2O95563 127 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 WDPCPO95876 746 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 HOXD4P09016 255 aaPredicted RBP10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF250P15622 560 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 ST6GAL1P15907 406 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 CXCL3P19876 107 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 GIFP27352 417 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SHC1P29353 583 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 PRR5P85299 388 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 KLF9Q13886 244 aaPredicted RBP10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 ST3GAL2Q16842 350 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 GARNL3Q5VVW2 1013 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 METTL11BQ5VVY1 283 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 OR4C11Q6IEV9 310 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 OR6V1Q8N148 313 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 PIAS4Q8N2W9 510 aaPredicted RBP10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC43A2Q8N370 569 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SPICQ8N5J4 248 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SIRT6Q8N6T7 355 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 OR2T4Q8NH00 348 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 ABHD4Q8TB40 342 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 FCRL4Q96PJ5 515 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 CD180Q99467 661 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 STRADBQ9C0K7 418 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 NANSQ9NR45 359 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 SOHLH2Q9NX45 425 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 TMEM5Q9Y2B1 443 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 PCNX2A6NKB5 2137 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 ASXL3Q9C0F0 2248 aa10.52□□□□□ -0.73
TSPAN1-201ENST00000372003 A0A0J9YY10 115 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 A0A1B0GUH1 482 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 hCG_1807616A0A1W2PRN6 198 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 RTCAO00442 366 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 EMC8O43402 210 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 AGR2O95994 175 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 IFNA16P05015 189 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CPN1P15169 458 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 RAB3BP20337 219 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CMPK1P30085 196 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CCKBRP32239 447 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 NCBP2P52298 156 aaKnown RBP eCLIP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 NRG3P56975 720 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 AP3S2P59780 193 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ACTC1P68032 377 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ACTA1P68133 377 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 POU6F2P78424 691 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 TGM3Q08188 693 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 POU4F2Q12837 409 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SNTB2Q13425 540 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 KCNAB1Q14722 419 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CLEC12AQ5QGZ9 265 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 PLEKHM3Q6ZWE6 761 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CEACAM19Q7Z692 300 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 UBE3DQ7Z6J8 389 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CPOQ8IVL8 374 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OR2L3Q8NG85 312 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SMIM4Q8WVI0 70 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 GIMAP1Q8WWP7 306 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 BBS4Q96RK4 519 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms