RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FAM98BQ52LJ0 330 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 IRAK1BP1Q5VVH5 260 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZFP1Q6P2D0 407 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SHQ1Q6PI26 577 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 HSDL2Q6YN16 418 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 VASH2Q86V25 355 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 PRR22Q8IZ63 422 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 Q8N1X5 172 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF619Q8N2I2 560 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF808Q8N4W9 903 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 Q8NA96 180 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OR4C3Q8NH37 302 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OR52P1PQ8NH57 321 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 M1APQ8TC57 530 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 TMBIM1Q969X1 311 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 EFHD2Q96C19 240 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 SLC47A1Q96FL8 570 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 MARS2Q96GW9 593 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 NAF1Q96HR8 494 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 ART5Q96L15 291 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF607Q96SK3 696 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF747Q9BV97 191 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 UGT2B28Q9BY64 529 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CTDSP1Q9GZU7 261 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SLC6A15Q9H2J7 730 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SCPEP1Q9HB40 452 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 NTN4Q9HB63 628 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF160Q9HCG1 818 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 Q9N2J8 555 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 BEX4Q9NWD9 120 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 ADPRHL2Q9NX46 363 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 P4HTMQ9NXG6 502 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CALML5Q9NZT1 146 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 COPS7AQ9UBW8 275 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 C19orf25Q9UFG5 118 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 FBXL4Q9UKA2 621 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 BAG5Q9UL15 447 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 NDRG4Q9ULP0 352 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SAMD4AQ9UPU9 718 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 PADI2Q9Y2J8 665 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 WDR45Q9Y484 360 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 FRYQ5TBA9 3013 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 hCG_2039718K7EN88 272 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 WWP2O00308 870 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ADAM10O14672 748 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 TSPAN4O14817 238 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 FFAR1O14842 300 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CLOCKO15516 846 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 HOXA3O43365 443 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 TSPAN2O60636 221 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 TPST2O60704 377 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 E2F6O75461 281 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SERPINB7O75635 380 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 UGT2B17O75795 530 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZFAND5O76080 213 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 PDE9AO76083 593 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SOX30O94993 753 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 GOSR1O95249 250 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 UTS2O95399 124 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 LGI1O95970 557 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 AK1P00568 194 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 IFNA14P01570 189 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ALPPP05187 535 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 ITGAMP11215 1152 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CYP4B1P13584 511 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CD82P27701 267 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 YAP1P46937 504 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 RAD23AP54725 363 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 EEF1A1P68104 462 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 DGCR2P98153 550 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 HOXC5Q00444 222 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 NPTX1Q15818 432 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ATP6AP1Q15904 470 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF141Q15928 474 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 IFI44LQ53G44 452 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 KLHL26Q53HC5 615 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF311Q5JNZ3 666 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ATP1A1-AS1Q5TC04 95 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 LPCAT4Q643R3 524 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 FCRLBQ6BAA4 426 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 DHRS4L2Q6PKH6 230 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 APOOLQ6UXV4 268 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF836Q6ZNA1 936 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SLC29A4Q7RTT9 530 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 PIWIL3Q7Z3Z3 882 aaKnown RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 TMEM179BQ7Z7N9 219 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 MRGPREQ86SM8 312 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 CARM1Q86X55 608 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZDHHC21Q8IVQ6 265 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SPARTQ8N0X7 666 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SLC34A3Q8N130 599 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 C17orf47Q8NEP4 570 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OR8K3Q8NH51 312 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 NUBPLQ8TB37 319 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 FAM81AQ8TBF8 368 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms