RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 COX7A2P14406 83 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 CHRNB4P30926 498 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 TGFBR1P36897 503 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 HTR2BP41595 481 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 ASMTP46597 345 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 SNRPGP62308 76 aaKnown RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 ID2Q02363 134 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 CEP78Q5JTW2 689 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 FAM219BQ5XKK7 198 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 C18orf63Q68DL7 685 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 PLET1Q6UQ28 207 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 TRILQ7L0X0 811 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 DND1Q8IYX4 353 aaKnown RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 RPRMLQ8N4K4 120 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 KRTCAP2Q8N6L1 136 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 C11orf65Q8NCR3 313 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 RND1Q92730 232 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 RBM18Q96H35 190 aaKnown RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 ART5Q96L15 291 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 DGAT2Q96PD7 388 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 PANX1Q96RD7 426 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 MND1Q9BWT6 205 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 PROK2Q9HC23 129 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 MCCC2Q9HCC0 563 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 ISYNA1Q9NPH2 558 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 NPDC1Q9NQX5 325 aaPredicted RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 ERVK13-1Q9NX77 482 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 ZNF226Q9NYT6 803 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 SH3BP4Q9P0V3 963 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 COPS7AQ9UBW8 275 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 HRKO00198 91 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 AQP7O14520 342 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 CTDSP2O14595 271 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 RGS5O15539 181 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 TMPRSS11DO60235 418 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 CYP7B1O75881 506 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 GPR75O95800 540 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 HLA-DQB1P01920 261 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 CLPSP04118 112 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 HSD3B1P14060 373 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 HSD3B2P26439 372 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 MSX1P28360 303 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 TLX1P31314 330 aaPredicted RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 GRK5P34947 590 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 RPS13P62277 151 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 SELENOWP63302 87 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 KCNJ10P78508 379 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 MLLT11Q13015 90 aaPredicted RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 GLYR1Q49A26 553 aaPredicted RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 TMEM201Q5SNT2 666 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 DDI2Q5TDH0 399 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 NXNL2Q5VZ03 156 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 BICRALQ6AI39 1079 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 ZNF441Q8N8Z8 693 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 DUSP18Q8NEJ0 188 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 OR4C15Q8NGM1 316 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 SELENOMQ8WWX9 145 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 NTNG2Q96CW9 530 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 REPS1Q96D71 796 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 MTERF1Q99551 399 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 COQ7Q99807 217 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 KCNS3Q9BQ31 491 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 PELOQ9BRX2 385 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 TTYH2Q9BSA4 534 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 RHNO1Q9BSD3 238 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 INPP5KQ9BT40 448 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 C14orf119Q9NWQ9 140 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 LYARQ9NX58 379 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 ADAM30Q9UKF2 790 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 TMA7Q9Y2S6 64 aaKnown RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 LIPGQ9Y5X9 500 aa13.55□□□□□ -0.24
LMO4-201ENST00000370542 ZNF469Q96JG9 3925 aaPredicted RBP13.55□□□□□ -0.24
LMO4-201ENST00000370542 A0A1W2PQ09 198 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 A0A1W2PR48 441 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 OR6C70A6NIJ9 312 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 OR6C76A6NM76 312 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 FAM166BA8MTA8 275 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 B4DXG7 233 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 NPIPA2E9PIF3 369 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 NPIPA3F8WFD2 350 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 ORC5O43913 435 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 SLC43A1O75387 559 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 P04436 131 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 FBXO45P0C2W1 286 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 HSMCR30P0CW71 290 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 GAAP10253 952 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 CFL1P23528 166 aaKnown RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 SDC2P34741 201 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms