RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 HLA-DOBP13765 273 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 F2RL1P55085 397 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 WDR5P61964 334 aaKnown RBP11.65□□□□□ -0.54
HCFC1-202ENST00000369984 RAB11AP62491 216 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 SLC6A19Q695T7 634 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 NEIL2Q969S2 332 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 NTN4Q9HB63 628 aa11.65□□□□□ -0.54
HCFC1-202ENST00000369984 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.65□□□□□ -0.55
HCFC1-202ENST00000369984 KCNK2O95069 426 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 SBK2P0C263 348 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 FOXA1P55317 472 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 PITX1P78337 314 aaPredicted RBP11.65□□□□□ -0.55
HCFC1-202ENST00000369984 SHISA6Q6ZSJ9 500 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 MOB3CQ70IA8 216 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 CYS1Q717R9 158 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 CLEC1AQ8NC01 280 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 NKX3-1Q99801 234 aaPredicted RBP11.65□□□□□ -0.55
HCFC1-202ENST00000369984 GON7Q9BXV9 100 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 GSTO2Q9H4Y5 243 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 HHLA2Q9UM44 414 aa11.65□□□□□ -0.55
HCFC1-202ENST00000369984 IGHG1P01857 330 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 IRF4Q15306 451 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ACVR1CQ8NER5 493 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CEPT1Q9Y6K0 416 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 MDC1Q14676 2089 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CDK4P11802 303 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 POU3F2P20265 443 aaPredicted RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 NTSR1P30989 418 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 MMP12P39900 470 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PPT1P50897 306 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 RBPJQ06330 500 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 RBMS3Q6XE24 437 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ACPTQ9BZG2 426 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SLAMF7Q9NQ25 335 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 A0A1B0GVG6 124 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 TGOLN2O43493 480 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PCBD1P61457 104 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 BCL7AQ4VC05 210 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 RNLSQ5VYX0 342 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 WBP2NLQ6ICG8 309 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 OR10K2Q6IF99 312 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 TIPARPQ7Z3E1 657 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ZC3H3Q8IXZ2 948 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 NT5DC2Q9H857 520 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 GPR32O75388 356 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 EMP2P54851 167 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 BAXQ07812 192 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 C18orf63Q68DL7 685 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 NRG4Q8WWG1 115 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 KRBOX1C9JBD0 128 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 TNFSF8P32971 234 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 TGFBR3Q03167 851 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 LTC4SQ16873 150 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ZNF836Q6ZNA1 936 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 LILRB4Q8NHJ6 448 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CD200R1Q8TD46 325 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 BORCS6Q96GS4 357 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 TSSK2Q96PF2 358 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SLC29A1Q99808 456 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 LMF2Q9BU23 707 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SEMA4GQ9NTN9 838 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CACNG3O60359 315 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 C21orf33P30042 268 aaPredicted RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CD70P32970 193 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 EIF2DP41214 584 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PCK2Q16822 640 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 LACC1Q8IV20 430 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SLC35F3Q8IY50 421 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ACOT4Q8N9L9 421 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 OR52R1Q8NGF1 315 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ADAMTS16Q8TE57 1224 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 BRI3BPQ8WY22 251 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SORBS1Q9BX66 1292 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ZDHHC7Q9NXF8 308 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PTHP01270 115 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 ERVFC1P60507 584 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 SPCS2Q15005 226 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 FCRL1Q96LA6 429 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 CMSS1Q9BQ75 279 aaKnown RBP11.64□□□□□ -0.55
HCFC1-202ENST00000369984 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 IL26Q9NPH9 171 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 RCE1Q9Y256 329 aa11.64□□□□□ -0.55
HCFC1-202ENST00000369984 C5P01031 1676 aa11.63□□□□□ -0.55
HCFC1-202ENST00000369984 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
HCFC1-202ENST00000369984 A0A0J9YY10 115 aa11.63□□□□□ -0.55
HCFC1-202ENST00000369984 GABRR3A8MPY1 467 aa11.63□□□□□ -0.55
HCFC1-202ENST00000369984 FOLR1P15328 257 aa11.63□□□□□ -0.55
HCFC1-202ENST00000369984 OR5M10Q6IEU7 315 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms