RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF81P51508 661 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ITGA1P56199 1179 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 IRF8Q02556 426 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 KRT33BQ14525 404 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SSX2Q16385 188 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MINDY4Q4G0A6 757 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RABL3Q5HYI8 236 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RPL13AP3Q6NVV1 102 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SLC30A6Q6NXT4 461 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 BTN2A1Q7KYR7 527 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 CALHM3Q86XJ0 350 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 CFAP206Q8IYR0 622 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 OR5AR1Q8NGP9 310 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF583Q96ND8 569 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SOX7Q9BT81 388 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 THUMPD3Q9BV44 507 aaKnown RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SPATA5L1Q9BVQ7 753 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HHATLQ9HCP6 504 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NUDT4Q9NZJ9 180 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 FBXL2Q9UKC9 423 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NTNG1Q9Y2I2 539 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GPR171O14626 319 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 PRKYO43930 277 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 PTHP01270 115 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 UROSP10746 265 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NPPBP16860 134 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HOXB9P17482 250 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GGT2P36268 569 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 KCNJ3P48549 501 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RBP2P50120 134 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HNMTP50135 292 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HHEXQ03014 270 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 TAP2Q03519 686 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 COTL1Q14019 142 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 TBR1Q16650 682 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SAPCD1Q5SSQ6 148 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 PWWP2BQ6NUJ5 590 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 FAM131AQ6UXB0 335 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GOLGA7Q7Z5G4 137 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 LAS2Q8IYD9 372 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SPICQ8N5J4 248 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 WDSUB1Q8N9V3 476 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RFT1Q96AA3 541 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM74Q96NL1 305 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MRPL37Q9BZE1 423 aaKnown RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 B3GAT2Q9NPZ5 323 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 AASSQ9UDR5 926 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF223Q9UK11 482 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF490Q9ULM2 529 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RHPN2P1A8MT19 583 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MKRN2OSH3BPM6 223 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GSTA4O15217 222 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 P2RX6O15547 441 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SUV39H1O43463 412 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GALR3O60755 368 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NDUFB7P17568 137 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RAB3BP20337 219 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NPR2P20594 1047 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MAP3K8P41279 467 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GZMMP51124 257 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HSD11B2P80365 405 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 GAGE1Q13065 139 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 NAE1Q13564 534 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HNF4GQ14541 408 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 KLHL17Q6TDP4 642 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 CHMP1BQ7LBR1 199 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MISPQ8IVT2 679 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 FGF11Q92914 225 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SEPHS2Q99611 448 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 C1QTNF6Q9BXI9 259 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 DPY30Q9C005 99 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ABCB9Q9NP78 766 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ZFP57Q9NU63 452 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 PCTPQ9UKL6 214 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 FBXL3Q9UKT7 428 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SLC22A14Q9Y267 594 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 FAM240BA0A1B0GVZ2 78 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 KDM4EB2RXH2 506 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 UGDHO60701 494 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 SLC22A3O75751 556 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 SERPIND1P05546 499 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 DNASE1P24855 282 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MSX1P28360 303 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 MAN2A2P49641 1150 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 TDGF1P3P51864 188 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
CSDE1-204ENST00000369530 UFM1P61960 85 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 CXADRP78310 365 aa6.29□□□□□ -1.4
CSDE1-204ENST00000369530 FOXO1Q12778 655 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms