RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 STAMBPO95630 424 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF682O95780 498 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 HSD17B1P14061 328 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 OR7A5Q15622 319 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 WDR88Q6ZMY6 472 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 DEF8Q6ZN54 512 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 CBLL1Q75N03 491 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 CCDC103Q8IW40 242 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 MCEMP1Q8IX19 187 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 FAM162AQ96A26 154 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 KTI12Q96EK9 354 aaPredicted RBP13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 SLC47A1Q96FL8 570 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 DCLRE1BQ9H816 532 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 CHST11Q9NPF2 352 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 KLHL13Q9P2N7 655 aa13.43□□□□□ -0.26
SMPDL3A-201ENST00000368440 A0A087WUJ7 227 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 PNMTP11086 282 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 IGFBP2P18065 325 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ATP6V1B2P21281 511 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 UQCRC1P31930 480 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 RPS5P46782 204 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 CTBP2P56545 445 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 H3F3AP84243 136 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 RASGEF1BQ0VAM2 473 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 RNPS1Q15287 305 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 FBXL19-AS1Q494R0 122 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 GLYATQ6IB77 296 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF613Q6PF04 617 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 NUFIP2Q7Z417 695 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 DHFR2Q86XF0 187 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 SLC43A2Q8N370 569 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ACBD4Q8NC06 268 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 OR6K3Q8NGY3 331 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 LRGUKQ96M69 825 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ENKD1Q9H0I2 346 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 PIGMQ9H3S5 423 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 C12orf49Q9H741 205 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 GLRX2Q9NS18 164 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 EMC9Q9Y3B6 208 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF716A6NP11 495 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 A8MXE2 369 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 FTCDNL1E5RQL4 147 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 DNPH1O43598 174 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 CHP2O43745 196 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 AKR7A3O95154 331 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 SLC35A1P78382 337 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 FXNQ16595 210 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 TMEM99Q8N816 258 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZNF610Q8N9Z0 462 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 RNASE6Q93091 150 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZHX1-C8orf76Q96EF9 292 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 BCO1Q9HAY6 547 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 S100A14Q9HCY8 104 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 ADPRHL2Q9NX46 363 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 GALNT8Q9NY28 637 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 SELENONQ9NZV5 590 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 KLHL9Q9P2J3 617 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 SLC7A7Q9UM01 511 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 SNX13Q9Y5W8 968 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 CELSR2Q9HCU4 2923 aa13.42□□□□□ -0.26
SMPDL3A-201ENST00000368440 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 MSTNO14793 375 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 ARPC2O15144 300 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 AHSA1O95433 338 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 GPIP06744 558 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 CD8BP10966 210 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 FUT4P22083 530 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 EDNRAP25101 427 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 EEF1A1P5Q5VTE0 462 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 GTF2IRD2BQ6EKJ0 949 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 LINC00114Q6XXX2 140 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 MEX3BQ6ZN04 569 aaKnown RBP13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 GDF7Q7Z4P5 450 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 GTF2IRD2Q86UP8 949 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 FAM86B1Q8N7N1 296 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 TAAR8Q969N4 342 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 AMBRA1Q9C0C7 1298 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 SEC14L4Q9UDX3 406 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 V9GYQ6 96 aa13.41□□□□□ -0.26
SMPDL3A-201ENST00000368440 YES1P07947 543 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 CBLP22681 906 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 P2RY4P51582 365 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 TRAP1Q12931 704 aaKnown RBP13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 PIN1Q13526 163 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 OTUD3Q5T2D3 398 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 PAQR6Q6TCH4 344 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 LZICQ8WZA0 190 aa13.4□□□□□ -0.26
SMPDL3A-201ENST00000368440 SLC25A36Q96CQ1 311 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms