RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 Q6ZPB1 254 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PGAP1Q75T13 922 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CCDC65Q8IXS2 484 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 FTMTQ8N4E7 242 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CCDC71LQ8N9Z2 235 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 HTR3CQ8WXA8 447 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 EFHD2Q96C19 240 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 C10orf35Q96D05 121 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CMTM7Q96FZ5 175 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF799Q96GE5 643 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 NPY6RQ99463 290 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 MRPL45Q9BRJ2 306 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 NAT9Q9BTE0 207 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 SUDS3Q9H7L9 328 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 DAZ3Q9NR90 486 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 THUMPD1Q9NXG2 353 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 ASB3Q9Y575 518 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 V9GY05 133 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PNPLA6Q8IY17 1366 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 RPAP1Q9BWH6 1393 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PLEKHH1Q9ULM0 1364 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 IGHV3OR16-13A0A075B7E8 117 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NSG1A0A0A6YYJ2 146 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 A0A1B0GVL5 298 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 CLRN2A0PK11 232 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 HSD17B6O14756 317 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 TIMM8AO60220 97 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NPIPB7O75200 414 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 OXSR1O95747 527 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PRB2P02812 416 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 GAPDHP04406 335 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 CCR1P32246 355 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 BTCP35070 178 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 DDOSTP39656 456 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 CTRLP40313 264 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 RPL13AP40429 203 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PKNOX1P55347 436 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 SEC61GP60059 68 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 TNFRSF17Q02223 184 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 ARL6IP1Q15041 203 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PAGE3Q5JUK9 113 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 C1orf100Q5SVJ3 147 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 C1orf146Q5VVC0 180 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF530Q6P9A1 599 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 KDELC1Q6UW63 502 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 SLC26A11Q86WA9 606 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 TRIM69Q86WT6 500 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 LRRC75A-AS1Q8N1F1 130 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NKAPP1Q8N9T2 125 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 LINC01555Q8NAE3 123 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 BRSK1Q8TDC3 778 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 DNAJA4Q8WW22 397 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 FAM151AQ8WW52 585 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 MAIP1Q8WWC4 291 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF606Q8WXB4 792 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 RDH5Q92781 318 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 UBE2E3Q969T4 207 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PAGE5Q96GU1 130 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 RBM14Q96PK6 669 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 TRIM62Q9BVG3 475 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PARD6BQ9BYG5 372 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NT5C3AQ9H0P0 336 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 C20orf85Q9H1P6 137 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NARFLQ9H6Q4 476 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 AZI2Q9H6S1 392 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 ZDHHC11Q9H8X9 412 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 FOLH1BQ9HBA9 442 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 SH2D2AQ9NP31 389 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 AIG1Q9NVV5 245 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 NEU3Q9UQ49 428 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 PRG3Q9Y2Y8 225 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 ARHGAP21Q5T5U3 1957 aa2.3□□□□□ -2.04
ECHDC1-201ENST00000368287 RBMY1BA6NDE4 496 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 BTBD17A6NE02 478 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RBMY1EA6NEQ0 496 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 SNTNA6NMZ2 147 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 A8MUA0 341 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 E9PBE3 544 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 POLR2DO15514 142 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 FCMRO60667 390 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 SNAPINO95295 136 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RBMY1DP0C7P1 496 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RBMY1A1P0DJD3 496 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 CCDC130P13994 396 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 ANXA13P27216 316 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 SELENOTP62341 195 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RIPK1Q13546 671 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 DPYSL2Q16555 572 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 OR2A2Q6IF42 318 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 C1orf94Q6P1W5 598 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 ENPP6Q6UWR7 440 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 RALGPS2Q86X27 583 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 ECHDC2Q86YB7 292 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 MFSD6LQ8IWD5 586 aa2.29□□□□□ -2.04
ECHDC1-201ENST00000368287 MKXQ8IYA7 352 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms