RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TRAPPC6AO75865 159 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 FRKP42685 505 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-206ENST00000368215 OR10A3P58181 314 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 TLE3Q04726 772 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 KDM8Q8N371 416 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 SIRT6Q8N6T7 355 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 ZNF283Q8N7M2 679 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 OR2T35Q8NGX2 323 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 C16orf52Q8NHV5 167 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 LGALS14Q8TCE9 139 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 FYTTD1Q96QD9 318 aaKnown RBP7.8□□□□□ -1.16
PTPRK-206ENST00000368215 ARHGAP9Q9BRR9 750 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 GALNT9Q9HCQ5 603 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 NOX4Q9NPH5 578 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 RBFOX1Q9NWB1 397 aaKnown RBP7.8□□□□□ -1.16
PTPRK-206ENST00000368215 KLHL9Q9P2J3 617 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 FBXL3Q9UKT7 428 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 MGAT4AQ9UM21 535 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 RPH3AQ9Y2J0 694 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-206ENST00000368215 NOP16Q9Y3C1 178 aaKnown RBP7.8□□□□□ -1.16
PTPRK-206ENST00000368215 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 V9GY05 133 aa7.8□□□□□ -1.16
PTPRK-206ENST00000368215 A0A0B4J203 849 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 C5orf51A6NDU8 294 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 KDM4EB2RXH2 506 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR2T7P0C7T2 308 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 MYF5P13349 255 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 DLX2Q07687 328 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 EIF2B1Q14232 305 aaKnown RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 LPAL2Q16609 132 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 FAM205BPQ63HN1 556 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 VASNQ6EMK4 673 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ALKBH2Q6NS38 261 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 QSOX2Q6ZRP7 698 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 GLCCI1Q86VQ1 547 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR13C3Q8NGS6 347 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR2T27Q8NH04 317 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 GPR148Q8TDV2 347 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CREB3L1Q96BA8 519 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 NUDT22Q9BRQ3 303 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CRB3Q9BUF7 120 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 TRPV4Q9HBA0 871 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CMC2Q9NRP2 79 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 INIPQ9NRY2 104 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ASB6Q9NWX5 421 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 RCE1Q9Y256 329 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 VWA8A3KMH1 1905 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 UNC13CQ8NB66 2214 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 SSX4O60224 188 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ITGA5P08648 1049 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ELK1P19419 428 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR3A3P47888 321 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR3A2P47893 321 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 SRP9P49458 86 aaKnown RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 SF3B4Q15427 424 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 VWA2Q5GFL6 755 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 PRAMEF17Q5VTA0 474 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 LYPD4Q6UWN0 246 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ESPNLQ6ZVH7 1005 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 PRSS45Q7RTY3 260 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 MARCH3Q86UD3 253 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 KIF18BQ86Y91 864 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 C15orf40Q8WUR7 153 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 TSLPQ969D9 159 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 OR1F2PQ96R84 312 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 GPA33Q99795 319 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 WDR77Q9BQA1 342 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ELOVL3Q9HB03 270 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ACOXLQ9NUZ1 547 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 C19orf25Q9UFG5 118 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 POLHQ9Y253 713 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 NOTOA8MTQ0 251 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CDC42EP2O14613 210 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ARPC1BO15143 372 aaKnown RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 TGM1P22735 817 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CRYBB2P43320 205 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 PTH2RP49190 550 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 MTNR1BP49286 362 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 EMP2P54851 167 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 CDK5Q00535 292 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 TPBGQ13641 420 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 FGFBP1Q14512 234 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 RPL22L1Q6P5R6 122 aaKnown RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 LRRN1Q6UXK5 716 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 VASH1Q7L8A9 365 aaPredicted RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 TXNDC15Q96J42 360 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ARHGDIGQ99819 225 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 FGF21Q9NSA1 209 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 IGKV1-8A0A0C4DH67 115 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 PRAMEF25A6NGN4 478 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 C2CD4DB7Z1M9 353 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 SLC6A8P48029 635 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 E2F1Q01094 437 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 EEF1A2Q05639 463 aaKnown RBP7.79□□□□□ -1.16
PTPRK-206ENST00000368215 GALEQ14376 348 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 RAB11BQ15907 218 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 ZIC1Q15915 447 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 PCGF3Q3KNV8 242 aa7.79□□□□□ -1.16
PTPRK-206ENST00000368215 KIRREL2Q6UWL6 708 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms