RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SULT1B1O43704 296 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 SRPX2O60687 465 aaPredicted RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 TPPPO94811 219 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 ECDO95905 644 aaPredicted RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 PNMTP11086 282 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 GPR3P46089 330 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 HCCSP53701 268 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 AP3S2P59780 193 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 HYAL1Q12794 435 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 IKZF1Q13422 519 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 FAM53BQ14153 422 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 GSG1Q2KHT4 349 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 MCATQ8IVS2 390 aaKnown RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 C19orf47Q8N9M1 422 aaKnown RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 ZNF527Q8NB42 609 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 OR11H7Q8NGC8 314 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 LGALS14Q8TCE9 139 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 LIPHQ8WWY8 451 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 MRPL38Q96DV4 380 aaKnown RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
CD48-201ENST00000368045 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 IRF2BPLQ9H1B7 796 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 CD93Q9NPY3 652 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 SLCO1C1Q9NYB5 712 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 MOKQ9UQ07 419 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 ZNF281Q9Y2X9 895 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 CHD7Q9P2D1 2997 aa13.09□□□□□ -0.31
CD48-201ENST00000368045 IMPA2O14732 288 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 PRAF2O60831 178 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SEMA4FO95754 770 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 TACSTD2P09758 323 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SULT1A3P0DMM9 295 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SULT1A4P0DMN0 295 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 ST6GAL1P15907 406 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SRMP19623 302 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 POU3F3P20264 500 aaPredicted RBP13.08□□□□□ -0.32
CD48-201ENST00000368045 GALNSP34059 522 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
CD48-201ENST00000368045 MRPS10P82664 201 aaKnown RBP13.08□□□□□ -0.32
CD48-201ENST00000368045 FUT7Q11130 342 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 ZNF684Q5T5D7 378 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 SPACA7Q96KW9 195 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 FAM60AQ9NP50 221 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 PRTFDC1Q9NRG1 225 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 COPS3Q9UNS2 423 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 MRPS7Q9Y2R9 242 aaKnown RBP13.08□□□□□ -0.32
CD48-201ENST00000368045 AK6Q9Y3D8 172 aaKnown RBP13.08□□□□□ -0.32
CD48-201ENST00000368045 ADAM18Q9Y3Q7 739 aa13.08□□□□□ -0.32
CD48-201ENST00000368045 MEIKINA0A087WXM9 373 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 OR6C68A6NDL8 312 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 IFITM5A6NNB3 132 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 TGFBR3LH3BV60 316 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CT45A8P0DMV1 189 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CT45A9P0DMV2 189 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 GDNFP39905 211 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ADH7P40394 386 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 GRK6P43250 576 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CCR5P51681 352 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 HHEXQ03014 270 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 BIKQ13323 160 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 HTR4Q13639 388 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 KLHL26Q53HC5 615 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CT45A2Q5DJT8 189 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ELFN2Q5R3F8 820 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ZBTB37Q5TC79 503 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CMTM4Q8IZR5 234 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 SLC22A18ASQ8N1D0 253 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 BCORP1Q8N888 145 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 FAM71CQ8NEG0 241 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 OR51L1Q8NGJ5 315 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 C15orf40Q8WUR7 153 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 RADILQ96JH8 1075 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 TTTY10Q9BZA0 68 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 PRODH2Q9UF12 536 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 MGAT4AQ9UM21 535 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 DTX4Q9Y2E6 619 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 OR10H1Q9Y4A9 318 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 A0A0B4J203 849 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 A0A1W2PPK0 400 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms