RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 UNC119BA6NIH7 251 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 BHLHE40O14503 412 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 GPR171O14626 319 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR1F1O43749 312 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 NCR1O76036 304 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 APOL3O95236 402 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ECDO95905 644 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 RRASP10301 218 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 TFPIP10646 304 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 UBL4AP11441 157 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 F3P13726 295 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 CTSEP14091 401 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 DNASE1P24855 282 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 MPIP34949 423 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 CLCNKAP51800 687 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 PRDX1Q06830 199 aaKnown RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 ZFP36L1Q07352 338 aaKnown RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 MFSD13AQ14CX5 517 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 DMKNQ6E0U4 476 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 TMPRSS11FQ6ZWK6 438 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 NR2C2APQ86WQ0 139 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 CPOQ8IVL8 374 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 SAMD12Q8N8I0 201 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 EXD3Q8N9H8 876 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR2L5Q8NG80 312 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR6C4Q8NGE1 309 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ABHD4Q8TB40 342 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 SMIM4Q8WVI0 70 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR1E3Q8WZA6 343 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 WDR92Q96MX6 357 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 FCRL4Q96PJ5 515 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ERMAPQ96PL5 475 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 TIMP4Q99727 224 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 UTP23Q9BRU9 249 aaKnown RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 CACNG6Q9BXT2 260 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 RERGLQ9H628 205 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 MTHFD2LQ9H903 347 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 PRDM7Q9NQW5 492 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 NANSQ9NR45 359 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 CMC2Q9NRP2 79 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 NUDT15Q9NV35 164 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ZNF624Q9P2J8 865 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 ZNF223Q9UK11 482 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 ZNF222Q9UK12 451 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 FBXL3Q9UKT7 428 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 RASD1Q9Y272 281 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 ZNF443Q9Y2A4 671 aaPredicted RBP10.59□□□□□ -0.71
USF1-201ENST00000368019 CHST2Q9Y4C5 530 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 OR1A2Q9Y585 309 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 MAB21L2Q9Y586 359 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 FLNCQ14315 2725 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 A0A1B0GUH1 482 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 CPSF4LA6NMK7 179 aaKnown RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 SMLR1H3BR10 107 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 SOCS6O14544 535 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 PGRMC2O15173 223 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 OGG1O15527 345 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 EEF1E1O43324 174 aaKnown RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 PEX14O75381 377 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 OR7A10O76100 309 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 TNFP01375 233 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 HOXC4P09017 264 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 PNLIPP16233 465 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 GLB1P16278 677 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 BMP7P18075 431 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 RAB3BP20337 219 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 RPS4Y1P22090 263 aaKnown RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 HIST1H1TP22492 207 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 SHC1P29353 583 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 TRHRP34981 398 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 MNDAP41218 407 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 MECP2P51608 486 aaKnown RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 KIAA1024LP59773 190 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 AP3S2P59780 193 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 RAB14P61106 215 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
USF1-201ENST00000368019 FOXD4Q12950 439 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 DUSP8Q13202 625 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 KLF9Q13886 244 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 TCEA2Q15560 299 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 TGIF1Q15583 401 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 AANATQ16613 207 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 FAM214AQ32MH5 1076 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 ARHGAP11BQ3KRB8 267 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 LINC00303Q3SY05 128 aa10.58□□□□□ -0.72
USF1-201ENST00000368019 LGALSLQ3ZCW2 172 aaPredicted RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
USF1-201ENST00000368019 GARNL3Q5VVW2 1013 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms