RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 SLC22A31A6NKX4 558 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 CDC14BO60729 498 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 EIF1BO60739 113 aaKnown RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 KRT33AO76009 404 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 CDC25BP30305 580 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 MAGEB1P43366 347 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 CLK1P49759 484 aaKnown RBP12.49□□□□□ -0.41
VAMP4-202ENST00000367740 SLC35A1P78382 337 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 LCN2P80188 198 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 UNC50Q53HI1 259 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 NOXRED1Q6NXP6 359 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 TMEM151AQ8N4L1 468 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF385DQ9H6B1 395 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 BIRC6Q9NR09 4857 aa12.49□□□□□ -0.41
VAMP4-202ENST00000367740 LCE2BO14633 110 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 ANKRD28O15084 1053 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 SUPT7LO94864 414 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 CSTAP01040 98 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 NAT2P11245 290 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 BCKDHAP12694 445 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 MAGEA12P43365 314 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 SELENOPP49908 381 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 OLFML2AQ68BL7 652 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 C16orf87Q6PH81 154 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 PAQR6Q6TCH4 344 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 GRINAQ7Z429 371 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 RAB8BQ92930 207 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 TMEM237Q96Q45 408 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 MRPL57Q9BQC6 102 aaKnown RBP12.48□□□□□ -0.41
VAMP4-202ENST00000367740 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-202ENST00000367740 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
VAMP4-202ENST00000367740 BEX1Q9HBH7 125 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
VAMP4-202ENST00000367740 PPP2R2CQ9Y2T4 447 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
VAMP4-202ENST00000367740 TRIM49D1C9J1S8 452 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 G3V4G9 280 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 TBX19O60806 448 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 BCAS1O75363 584 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-202ENST00000367740 UPK3AO75631 287 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 RSL1D1O76021 490 aaKnown RBP12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ENO1P06733 434 aaKnown RBP12.47□□□□□ -0.41
VAMP4-202ENST00000367740 CCNA2P20248 432 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 FKBP2P26885 142 aaKnown RBP12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ARR3P36575 388 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ATP4BP51164 291 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 FOXA1P55317 472 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 RAG2P55895 527 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF141Q15928 474 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 UAP1Q16222 522 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-202ENST00000367740 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 OR4F5Q8NH21 305 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ADAMTS15Q8TE58 950 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 PPCDCQ96CD2 204 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 ACTRT3Q9BYD9 372 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 NMUR2Q9GZQ4 415 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 FZR1Q9UM11 496 aa12.47□□□□□ -0.41
VAMP4-202ENST00000367740 C3orf80F5H4A9 247 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 GLRXP35754 106 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 MRPS25P82663 173 aaKnown RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 RELBQ01201 579 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 PDE7AQ13946 482 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 IMPG1Q17R60 797 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 VAX1Q5SQQ9 334 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 KPRPQ5T749 579 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF771Q7L3S4 317 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 MDP1Q86V88 176 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 TMEM99Q8N816 258 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SDF2Q99470 211 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 DPH5Q9H2P9 285 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SERHL2Q9H4I8 314 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 REEP4Q9H6H4 257 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 GPATCH2Q9NW75 528 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SH3BP4Q9P0V3 963 aa12.46□□□□□ -0.41
VAMP4-202ENST00000367740 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-202ENST00000367740 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 TMEM72A0PK05 275 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 ZC3H12DA2A288 527 aaKnown RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 FAM181BA6NEQ2 426 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms