RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ARL8BQ9NVJ2 186 aa13□□□□□ -0.33
SF3B5-201ENST00000367569 C6orf203Q9P0P8 240 aaPredicted RBP13□□□□□ -0.33
SF3B5-201ENST00000367569 EDARQ9UNE0 448 aa13□□□□□ -0.33
SF3B5-201ENST00000367569 TESMINQ9Y4I5 508 aa13□□□□□ -0.33
SF3B5-201ENST00000367569 PRR14LQ5THK1 2151 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 A8MVM7 634 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 LRRN3E7EW58 273 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
SF3B5-201ENST00000367569 LGI1O95970 557 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 RAF1P04049 648 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 YES1P07947 543 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 NCK1P16333 377 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 NTF4P34130 210 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 CDH12P55289 794 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 ADAM8P78325 824 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 SLC35A1P78382 337 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 ZSWIM7Q19AV6 140 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 KRTAP21-3Q3LHN1 58 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 ENTPD8Q5MY95 495 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
SF3B5-201ENST00000367569 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 CASP12Q6UXS9 341 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 STAC2Q6ZMT1 411 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 DEF8Q6ZN54 512 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 SLC30A8Q8IWU4 369 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 SLC15A3Q8IY34 581 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 SLC43A2Q8N370 569 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 RNF148Q8N7C7 305 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 PIGXQ8TBF5 258 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 TPD52L3Q96J77 140 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 SH3GL1Q99961 368 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 TAPBPLQ9BX59 468 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 TRIM2Q9C040 744 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 GSX1Q9H4S2 264 aaPredicted RBP12.99□□□□□ -0.33
SF3B5-201ENST00000367569 BCO1Q9HAY6 547 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 PLSCR4Q9NRQ2 329 aa12.99□□□□□ -0.33
SF3B5-201ENST00000367569 A0A0B4J2E0 115 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 A0A1B0GX12 115 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 A0A1W2PPR1 153 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 C16orf97H3BN30 126 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 SIAH2O43255 324 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 LYZL6O75951 148 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 HRGP04196 525 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 GPIP06744 558 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 HOXB4P17483 251 aaPredicted RBP12.98□□□□□ -0.33
SF3B5-201ENST00000367569 OR1E2P47887 323 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 GSK3BP49841 420 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 PSME3P61289 254 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 DEFB113Q30KQ7 82 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 C9orf135Q5VTT2 229 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 WDR88Q6ZMY6 472 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 CARM1Q86X55 608 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 WFDC8Q8IUA0 241 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 ZNF100Q8IYN0 542 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 KDM8Q8N371 416 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 RBM15BQ8NDT2 890 aaKnown RBP12.98□□□□□ -0.33
SF3B5-201ENST00000367569 ACTR6Q9GZN1 396 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 ARL2BPQ9Y2Y0 163 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 NOSIPQ9Y314 301 aaKnown RBP12.98□□□□□ -0.33
SF3B5-201ENST00000367569 SH3GLB1Q9Y371 365 aa12.98□□□□□ -0.33
SF3B5-201ENST00000367569 ELOVL7A1L3X0 281 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 NPIPB7O75200 414 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 ADAP00813 363 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 NPPAP01160 153 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 THY1P04216 161 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 PNMTP11086 282 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 GTF2E2P29084 291 aaKnown RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 OR3A2P47893 321 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 IL1RL1Q01638 556 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 LGALS3BPQ08380 585 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 KEAP1Q14145 624 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 C8orf82Q6P1X6 216 aaPredicted RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 ERICH5Q6P6B1 374 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 C6orf89Q6UWU4 347 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 ARPINQ7Z6K5 226 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 PIGWQ7Z7B1 504 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 GALNT5Q7Z7M9 940 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 UBE2J2Q8N2K1 259 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 FAM156AQ8NDB6 213 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 PROX1Q92786 737 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 TAAR8Q969N4 342 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 SLC35B4Q969S0 331 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 PIK3IP1Q96FE7 263 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 NAA11Q9BSU3 229 aaPredicted RBP12.97□□□□□ -0.33
SF3B5-201ENST00000367569 ALG2Q9H553 416 aa12.97□□□□□ -0.33
SF3B5-201ENST00000367569 EFCAB1Q9HAE3 211 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms