RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SGK2Q9HBY8 427 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NSG2Q9Y328 171 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MAFBQ9Y5Q3 323 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GBE1Q04446 702 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM241Q24JQ0 296 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM184AQ6ZMB5 413 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZBTB34Q8NCN2 500 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NEIL1Q96FI4 390 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OVOL2Q9BRP0 275 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GPR61Q9BZJ8 451 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LANCL2Q9NS86 450 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 C19orf25Q9UFG5 118 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 KLK8O60259 260 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GLCEO94923 617 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LINC00614P0C842 121 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NR2F1P10589 423 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 USF1P22415 310 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FAM131BQ86XD5 332 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 C1QL4Q86Z23 238 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 BAP18Q8IXM2 172 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LCORQ96JN0 433 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MUC3BQ9H195 1237 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 A0A087WZY1 265 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DCTDP32321 178 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RAB9AP51151 201 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 P2RX3P56373 397 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 NFATC2Q13469 925 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LRRC15Q8TF66 581 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FAM46BQ96A09 425 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RAB22AQ9UL26 194 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 WDR45Q9Y484 360 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FAM24AA6NFZ4 105 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC6A1P30531 599 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HSH2DQ96JZ2 352 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DSPPQ9NZW4 1301 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 EPHA3P29320 983 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BDKRB2P30411 391 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DNASE1L1P49184 302 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HNRNPA3P51991 378 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CHRFAM7AQ494W8 412 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PARGQ86W56 976 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CDRT4Q8N9R6 151 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FAM98AQ8NCA5 519 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GSKIPQ9P0R6 139 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CYTIPO60759 359 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 AZGP1P25311 298 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 KIR2DS2P43631 304 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ERVPABLB-1P60509 514 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC35A2P78381 396 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HLXQ14774 488 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HTR3DQ70Z44 454 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 AMIGO1Q86WK6 493 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 APOLD1Q96LR9 279 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HSD3B7Q9H2F3 369 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TAS2R16Q9NYV7 291 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SEC11BP0C7V7 166 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLAMF1Q13291 335 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 COX15Q7KZN9 410 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FBLIM1Q8WUP2 373 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DUSP26Q9BV47 211 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 LRIT1Q9P2V4 623 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 GPR55Q9Y2T6 319 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 BAZ2BQ9UIF8 2168 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 C3P01024 1663 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 JMJD7P0C870 316 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SOWAHCQ53LP3 525 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 NXNL2Q5VZ03 156 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CERS5Q8N5B7 392 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DCAF4L2Q8NA75 395 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR5H6Q8NGV6 325 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 HOXB13Q92826 284 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PRR11Q96HE9 360 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MRGPRX3Q96LB0 322 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OR2A14Q96R47 310 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ITGB2P05107 769 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SPCS3P61009 180 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 IL24Q13007 206 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 TRIM48Q8IWZ4 208 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PTGR2Q8N8N7 351 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CDH20Q9HBT6 801 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ENAMQ9NRM1 1142 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CLEC3AO75596 197 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 PFKMP08237 780 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ANXA4P09525 319 aaPredicted RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ADARB1P78563 741 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DCBLD1Q8N8Z6 715 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 FBXO27Q8NI29 283 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 DIP2CQ9Y2E4 1556 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 MFNGO00587 321 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CLDN20P56880 219 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF621Q6ZSS3 439 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 OLIG3Q7RTU3 272 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CCDC190Q86UF4 302 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 CNTNAP3Q9BZ76 1288 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SLC27A5Q9Y2P5 690 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 VIRMAQ69YN4 1812 aaKnown RBP3.5□□□□□ -1.85
SYNE1-207ENST00000367255 POU2F2P09086 479 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 SELENOVP59797 346 aa3.5□□□□□ -1.85
SYNE1-207ENST00000367255 ADGRG5Q8IZF4 528 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms