RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FCRLAQ7L513 359 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM179BQ7Z7N9 219 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 DNAAF1Q8NEP3 725 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 DCUN1D4Q92564 292 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 PRSS16Q9NQE7 514 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 ASB1Q9Y576 335 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 HEXBP07686 556 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 GPLD1P80108 840 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 RSU1Q15404 277 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 OR7G2Q8NG99 324 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 S100PBPQ96BU1 408 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 CCDC86Q9H6F5 360 aaKnown RBP10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 LRIT2A6NDA9 550 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 FZD6O60353 706 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 PEA15Q15121 130 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 MPEG1Q2M385 716 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 TTLL8A6PVC2 850 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF780AO75290 641 aaPredicted RBP10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 CALCBP10092 127 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 PTPN6P29350 595 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 HHEXQ03014 270 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 SF3B4Q15427 424 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC16A12Q6ZSM3 486 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 DTX3Q8N9I9 347 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 PIGMQ9H3S5 423 aa10.96□□□□□ -0.65
CDC42BPA-202ENST00000366764 HOXA9P31269 272 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 GPR18Q14330 331 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 FYTTD1Q96QD9 318 aaKnown RBP10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 RNF215Q9Y6U7 377 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 TIMP1P01033 207 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.662e-6■■■■■ 27.5
CDC42BPA-202ENST00000366764 C8orf82Q6P1X6 216 aaPredicted RBP10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 CHST8Q9H2A9 424 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZSWIM8A7E2V4 1837 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 ERVK-25P63136 954 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 GPR176Q14439 515 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZBTB8AQ96BR9 441 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 APOOQ9BUR5 198 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 WASH6PQ9NQA3 447 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 SCO2O43819 266 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 CD14P08571 375 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 STEAP2Q8NFT2 490 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 WDR76Q9H967 626 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 RLIMQ9NVW2 624 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 SAGE1Q9NXZ1 904 aa10.96□□□□□ -0.66
CDC42BPA-202ENST00000366764 IGLV3-16A0A075B6K0 115 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 TCTN3Q6NUS6 607 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SCARB1Q8WTV0 552 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 APOBEC3BQ9UH17 382 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 EMP3P54852 163 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZNF585AQ6P3V2 769 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 LMF1Q96S06 567 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 LPLP06858 475 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SRPXP78539 464 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 BAK1Q16611 211 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SMIM19Q96E16 107 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 PEX11GQ96HA9 241 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 A0A1B0GUH1 482 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 ASPDHA6ND91 283 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SNRPGP15A8MWD9 76 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 ELK1P19419 428 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 LSSP48449 732 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CAV3P56539 151 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CXADRP78310 365 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 RBPMSQ93062 196 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 DEFB126Q9BYW3 111 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZNF850A8MQ14 1090 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 PRKACAP17612 351 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 HYAL2Q12891 473 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SDR9C7Q8NEX9 313 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 UBE2FQ969M7 185 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SRPK3Q9UPE1 567 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 PRAMEF26H0Y7S4 382 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 TBX19O60806 448 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 RAB38P57729 211 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 YPEL5P62699 121 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 NNATQ16517 81 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 EMC4Q5J8M3 183 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 LOC100289279A0A1B0GTE1 492 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 AIPO00170 330 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC35E2P0CK97 266 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CSNK2A1P68400 391 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CD300LDQ6UXZ3 194 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CSNK2A3Q8NEV1 391 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 OR56B1Q8NGI3 324 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 PKMYT1Q99640 499 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC6A20Q9NP91 592 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CSF3P09919 207 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 SBK2P0C263 348 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 MISPQ8IVT2 679 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 CMTM1Q8IZ96 169 aa10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 FAM160A2Q8N612 972 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-202ENST00000366764 OR6M1Q8NGM8 313 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms