RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NT5MQ9NPB1 228 aa2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 MARCH5Q9NX47 278 aa2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 THUMPD1Q9NXG2 353 aaKnown RBP2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 STAP1Q9ULZ2 295 aa2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 TMCO1Q9UM00 188 aa2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 UGT2A1Q9Y4X1 527 aa2.71□□□□□ -1.98
RNU6-28P-201ENST00000362378 CCDC182A6NF36 153 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 ZFP92A6NM28 416 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 LOC110117498-PIK3R3F6TDL0 507 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 HIP1O00291 1037 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 CIB2O75838 187 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SNAPINO95295 136 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 OXSR1O95747 527 aaPredicted RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 TIMP1P01033 207 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 GAPDHP04406 335 aaKnown RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 CRYGBP07316 175 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 RBMY1CP0DJD4 496 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SHMT2P34897 504 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 KIR2DS4P43632 304 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 TAF6P49848 677 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 TPMTP51580 245 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SCRN3Q0VDG4 424 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR5I1Q13606 314 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 GNMTQ14749 295 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 BCL7AQ4VC05 210 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 EOGTQ5NDL2 527 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SAMD4BQ5PRF9 694 aaKnown RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 METAP1DQ6UB28 335 aaPredicted RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 PRSS41Q7RTY9 318 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 FAM220AQ7Z4H9 259 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 PAQR7Q86WK9 346 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 ECHDC2Q86YB7 292 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 NUDCD3Q8IVD9 361 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 ZBED8Q8IZ13 594 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 RDH10Q8IZV5 341 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 CEND1Q8N111 149 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 TMEM252Q8N6L7 170 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 BBS1Q8NFJ9 593 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR2L3Q8NG85 312 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR2AP1Q8NGE2 309 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 RAB3IL1Q8TBN0 382 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 BRSK1Q8TDC3 778 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 ANKRD49Q8WVL7 239 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 DNAJA4Q8WW22 397 aaPredicted RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 CNOT6LQ96LI5 555 aaKnown RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 CNN2Q99439 309 aaKnown RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 FMO2Q99518 471 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 HIST1H4GQ99525 98 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 ARHGDIGQ99819 225 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 MRPL45Q9BRJ2 306 aaKnown RBP2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 NICN1Q9BSH3 213 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 PPA2Q9H2U2 334 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 PTGES2Q9H7Z7 377 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SLC2A8Q9NY64 477 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 SLC7A8Q9UHI5 535 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 KIF25Q9UIL4 384 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 V9GY05 133 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 NSD2O96028 1365 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 TNRQ92752 1358 aa2.7□□□□□ -1.98
RNU6-28P-201ENST00000362378 IGHV3OR16-13A0A075B7E8 117 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 CTAGE15A4D2H0 777 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR5B21A6NL26 309 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 E7ENQ6 273 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 MBTPS2O43462 519 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 ERLIN1O75477 346 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 MCF2P10911 925 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 CASP14P31944 242 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 VHLP40337 213 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 KLK7P49862 253 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 KPNA2P52292 529 aaKnown RBP2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 PRMT2P55345 433 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 TLE4Q04727 773 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 ZNF763Q0D2J5 394 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 MRPL28Q13084 256 aaKnown RBP2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 PPIL2Q13356 520 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 PLD1Q13393 1074 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 KYAT1Q16773 422 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 C1orf146Q5VVC0 180 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 CTAGE6Q86UF2 777 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 ZNF100Q8IYN0 542 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 C6orf223Q8N319 242 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 C14orf178Q8N769 122 aaPredicted RBP2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 TPRX1Q8N7U7 411 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 NKAPP1Q8N9T2 125 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 SDR9C7Q8NEX9 313 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR52I1Q8NGK6 324 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 OR1L6Q8NGR2 347 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 C7orf33Q8WU49 177 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 FGF11Q92914 225 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 TM4SF19Q96DZ7 209 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 IFT74Q96LB3 600 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 PANX2Q96RD6 677 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 FAIM2Q9BWQ8 316 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 SH2D2AQ9NP31 389 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 HOXC10Q9NYD6 342 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 CD274Q9NZQ7 290 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 PISDQ9UG56 409 aa2.69□□□□□ -1.98
RNU6-28P-201ENST00000362378 IKZF2Q9UKS7 526 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms