RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ADAM29Q9UKF5 820 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 PRKAR1BP31321 381 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 RAD52P43351 418 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 CCR9P51686 369 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 VASNQ6EMK4 673 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR6V1Q8N148 313 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR5T3Q8NGG3 340 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 OR13C3Q8NGS6 347 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 PAQR8Q8TEZ7 354 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 MS4A6EQ96DS6 147 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 Q96M85 177 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 TSSK2Q96PF2 358 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 AIFM2Q9BRQ8 373 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF701Q9NV72 531 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-201ENST00000361866 SDHAF2Q9NX18 166 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
COL6A1-201ENST00000361866 SURF4O15260 269 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ADH1BP00325 375 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TNFP01375 233 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 SRMP19623 302 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 S100A11P31949 105 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TSSK4Q6SA08 328 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TEX261Q6UWH6 196 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 OR7G2Q8NG99 324 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 DHRS9Q9BPW9 319 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 APOOQ9BUR5 198 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 MBNL1Q9NR56 388 aaKnown RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 INPP5EQ9NRR6 644 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 PTTG3PQ9NZH4 202 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 U3KQ87 197 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 PRRT4C9JH25 899 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 HLA-AP01891 365 aaKnown RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 CCR2P41597 374 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 MAGEB1P43366 347 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 RPE65Q16518 533 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 LIX1LQ8IVB5 337 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GLB1L2Q8IW92 636 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ELF4Q99607 663 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 M0QYG6 137 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GPR171O14626 319 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 RGS13O14921 159 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GPR75O95800 540 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF250P15622 560 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 YIF1BQ5BJH7 314 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 UBE2NLQ5JXB2 153 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 LCN10Q6JVE6 187 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 OR2T27Q8NH04 317 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 CHAC2Q8WUX2 184 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ACTR10Q9NZ32 417 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 COL11A2P13942 1736 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 SDC3O75056 442 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 LALBAP00709 142 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 EIF5AP63241 154 aaKnown RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 IL13RA1P78552 427 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 TAGLNQ01995 201 aaKnown RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 IRF3Q14653 427 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 DUSP6Q16828 381 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 IDO2Q6ZQW0 420 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 OR8D4Q8NGM9 314 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 NPRL2Q8WTW4 380 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-201ENST00000361866 FBXL4Q9UKA2 621 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 MAFFQ9ULX9 164 aa12.86□□□□□ -0.35
COL6A1-201ENST00000361866 IGLV3-16A0A075B6K0 115 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 MAN2B1O00754 1011 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 PER3P56645 1201 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 TMEM64Q6YI46 380 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 Q6ZNB5 142 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ST8SIA4Q92187 359 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 ZNF285Q96NJ3 590 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 SDF2Q99470 211 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-201ENST00000361866 SLC38A1Q9H2H9 487 aa12.85□□□□□ -0.35
COL6A1-201ENST00000361866 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms