RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 A8MV72 311 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 SPINT2O43291 252 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CSN1S1P47710 185 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CXCR4P61073 352 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 POU3F1Q03052 451 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 DEFB110Q30KQ9 67 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ADIPOR2Q86V24 386 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ZNF687Q8N1G0 1237 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 IP6K3Q96PC2 410 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR7D2Q96RA2 312 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 MRPS2Q9Y399 296 aaKnown RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR2T7P0C7T2 308 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 EIF2DP41214 584 aaKnown RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 MORN1Q5T089 497 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PGAP1Q75T13 922 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 NEIL2Q969S2 332 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PPA2Q9H2U2 334 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 IL37Q9NZH6 218 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PPT1P50897 306 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CD200R1Q8TD46 325 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 KCNE4Q8WWG9 221 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SLAMF9Q96A28 289 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 TOX2Q96NM4 488 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 KCMF1Q9P0J7 381 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SSUH2Q9Y2M2 353 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ARNTLO00327 626 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 AADACP22760 399 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF140P52738 457 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 RTP2Q5QGT7 225 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 NLRP8Q86W28 1048 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 NAGSQ8N159 534 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OR51A2Q8NGJ7 313 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 MOKQ9UQ07 419 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 RHBDD3Q9Y3P4 386 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SIGLEC6O43699 453 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 AOAHP28039 575 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CLDN10P78369 228 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF585AQ6P3V2 769 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 APCDD1Q8J025 514 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZFPM2Q8WW38 1151 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF597Q96LX8 424 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF583Q96ND8 569 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 XYLT2Q9H1B5 865 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SLC39A9Q9NUM3 307 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 MYOCOSA0A1B0GUC4 107 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CPMP14384 443 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 HTR2CP28335 458 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 RBMS2Q15434 407 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 PRAMEF9Q5VWM5 478 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 C6orf89Q6UWU4 347 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CHTF18Q8WVB6 975 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 TMEM59Q9BXS4 323 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SLC9B1P1A6NJY1 282 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 NFYBP25208 207 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ERVPABLB-1P60509 514 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 WDR5P61964 334 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF74Q16587 644 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 NDUFAF7Q7L592 441 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 NT5C3BQ969T7 300 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 LIN28AQ9H9Z2 209 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 PATZ1Q9HBE1 687 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 OLAHQ9NV23 265 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 PIK3C2AO00443 1686 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 C17orf67Q0P5P2 114 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 SLC30A7Q8NEW0 376 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 BBS1Q8NFJ9 593 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OR1S2Q8NGQ3 325 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SEMA6CQ9H3T2 930 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 MYO5AQ9Y4I1 1855 aaKnown RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 C1orf105O95561 183 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ACP2P11117 423 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF765Q7L2R6 523 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SERPINA12Q8IW75 414 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 EDAQ92838 391 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CDS1Q92903 461 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 GORASP2Q9H8Y8 452 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF705FA8MVS1 300 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 GFRA2O00451 464 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OIP5O43482 229 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CTXN2P0C2S0 81 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF705DP0CH99 300 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 ZNF705BP0CI00 300 aaPredicted RBP9.03□□□□□ -0.96
CUX1-203ENST00000360264 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 BABAM2Q9NXR7 383 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SERPINA2P20848 420 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SIMC1Q8NDZ2 872 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 OR1E3Q8WZA6 343 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 MUTYHQ9UIF7 546 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 K7EPK0 472 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 SPDEFO95238 335 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 DBHP09172 617 aa9.03□□□□□ -0.96
CUX1-203ENST00000360264 DCDP81605 110 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms