RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 PIGXQ8TBF5 258 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 ZPLD1Q8TCW7 415 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 BPIFA2Q96DR5 249 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 SGTBQ96EQ0 304 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 PAQR5Q9NXK6 330 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 CAMK2AQ9UQM7 478 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 TMEM5Q9Y2B1 443 aa11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 MAGED1Q9Y5V3 778 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-201ENST00000359683 ZGRF1Q86YA3 2104 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 LRRN3E7EW58 273 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 G3V2T6 193 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 SULT2B1O00204 365 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 KLF4O43474 513 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 DNPH1O43598 174 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 OR7A10O76100 309 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 CH25HO95992 272 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 MT-ATP6P00846 226 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 GASTP01350 101 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 FUT1P19526 365 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 MAKP20794 623 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 PRKACGP22612 351 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 OR2B6P58173 313 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 RPS3AP61247 264 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 CSNK2A1P68400 391 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 SLC35A1P78382 337 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 H3F3AP84243 136 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 MFSD13AQ14CX5 517 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 C3AR1Q16581 482 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 EMC4Q5J8M3 183 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 PGBD2Q6P3X8 592 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 Q6ZPB1 254 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 CDK20Q8IZL9 346 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 ST6GALNAC3Q8NDV1 305 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 OR10G2Q8NGC3 310 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 OR9Q2Q8NGE9 314 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 GNPDA2Q8TDQ7 276 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 DNAJA3Q96EY1 480 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 MOGAT1Q96PD6 335 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 FEVQ99581 238 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 GPA33Q99795 319 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 FKRPQ9H9S5 495 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 OAZ3Q9UMX2 235 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 MGAT4BQ9UQ53 548 aa11.12□□□□□ -0.63
NIF3L1-201ENST00000359683 CXCL13O43927 109 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ASAH2BP0C7U1 165 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF23P17027 643 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 CBLP22681 906 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 EIF1AXP47813 144 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 GSSP48637 474 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 OR7A5Q15622 319 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF239Q16600 458 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ADGRE4PQ86SQ3 457 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 MEX3DQ86XN8 651 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 LRRC17Q8N6Y2 441 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ICA1LQ8NDH6 482 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 OR5M9Q8NGP3 310 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 SLC25A36Q96CQ1 311 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 TUBA1CQ9BQE3 449 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 DGCR6LQ9BY27 220 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 SRXN1Q9BYN0 137 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 GABARAPL1Q9H0R8 117 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 TIGARQ9NQ88 270 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 NANSQ9NR45 359 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 PNPLA3Q9NST1 481 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ALKBH4Q9NXW9 302 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF229Q9UJW7 825 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
NIF3L1-201ENST00000359683 SAC3D1A6NKF1 404 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 EFCAB9A8MZ26 197 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 CDC42EP2O14613 210 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 EIF1BO60739 113 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 PTP4A3O75365 173 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 ATP6V1G2O95670 118 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 ANXA8P13928 327 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 FPR3P25089 353 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 GRPRP30550 384 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 GPR4P46093 362 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 RBPJQ06330 500 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 SLC34A1Q06495 639 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 TSPAN31Q12999 210 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 SGCBQ16585 318 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 FAHD1Q6P587 224 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 PAQR6Q6TCH4 344 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 CD300LDQ6UXZ3 194 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 CHMP1BQ7LBR1 199 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 MAMDC2Q7Z304 686 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 STK32CQ86UX6 486 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms