RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TOMM40LQ969M1 308 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 KATNB1Q9BVA0 655 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SLCO5A1Q9H2Y9 848 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 A0A1W2PQ45 241 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 A0A1W2PQY0 241 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RFPL4AA6NLU0 287 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SEC14L6B5MCN3 397 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RFPL4AL1F8VTS6 287 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MPIG6BO95866 241 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CD52P31358 61 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 AKR1C3P42330 323 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 FABP9Q0Z7S8 132 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ETFDHQ16134 617 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SEC22AQ96IW7 307 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 NTMT1Q9BV86 223 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 BOCQ9BWV1 1114 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 FZD3Q9NPG1 666 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 B3GAT2Q9NPZ5 323 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 IFT172Q9UG01 1749 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CXCL11O14625 94 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 KCNK5O95279 499 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 AK1P00568 194 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ARRB2P32121 409 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SNCAP37840 140 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RIN1Q13671 783 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PGAP3Q96FM1 320 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TDP1Q9NUW8 608 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TAS2R5Q9NYW4 299 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 COLEC10Q9Y6Z7 277 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ELOA3CA0A087WX78 387 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 A0A1W2PPH5 198 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 GPR137BO60478 399 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MT-ND4LP03901 98 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 QDPRP09417 244 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 HOXB1P14653 301 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ARL3P36405 182 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CTSOP43234 321 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RFX2P48378 723 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SH2D5Q6ZV89 423 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR9A1PQ8NGU1 263 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR2T4Q8NH00 348 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SLC12A9Q9BXP2 914 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CACNG4Q9UBN1 327 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ELF5Q9UKW6 265 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ADH1CP00326 375 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF25P17030 456 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SMPD1P17405 629 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CXCL9Q07325 125 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 C15orf54Q8N8G6 183 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 FUBP3Q96I24 572 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PTDSS2Q9BVG9 487 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RNF39Q9H2S5 420 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR51M1Q9H341 326 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PCDHGA5Q9Y5G8 931 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CALCBP10092 127 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF30P17039 623 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PCMT1P22061 227 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 P2RX1P51575 399 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MRPS34P82930 218 aaKnown RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 XKR7Q5GH72 579 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF704Q6ZNC4 412 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM99Q8N816 258 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 HSD17B11Q8NBQ5 300 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 HCAR1Q9BXC0 346 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 N4BP2Q86UW6 1770 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 FOLR1P15328 257 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ELFN2Q5R3F8 820 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 GTF2H5Q6ZYL4 71 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RNF180Q86T96 592 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CCDC54Q8NEL0 328 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 HOXB13Q92826 284 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LTB4R2Q9NPC1 389 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 J3KTA2 159 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MAFKO60675 156 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 KCNE1P15382 129 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF28P17035 718 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EPHA2P29317 976 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CTBSQ01459 385 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 BDH1Q02338 343 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 GPRIN1Q7Z2K8 1008 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM123Q8N131 208 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR1S1Q8NH92 325 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OLIG1Q8TAK6 271 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 GLYATL2Q8WU03 294 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 F2RL3Q96RI0 385 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 INTS14Q96SY0 518 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EDEM2Q9BV94 578 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ANKRD19PQ9H560 264 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SLC7A7Q9UM01 511 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CCDC163A0A0D9SF12 145 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SNRPGP15A8MWD9 76 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 DRD2P14416 443 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ATP5A1P25705 553 aaKnown RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CX3CR1P49238 355 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 IFITM2Q01629 132 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR8J2Q8NGG1 315 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms