RNA–Protein interactions for RNA: ENST00000357052.7

RAB4B-201, Transcript of RAB4B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4B, Length 1,133 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-201ENST00000357052 ETFAP13804 333 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 IDO1P14902 403 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 CDH2P19022 906 aaPredicted RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 CRATP43155 626 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 CRISP3P54108 245 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 WDR4P57081 412 aaKnown RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 PRPS1P60891 318 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 SLC25A3Q00325 362 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 MAPK11Q15759 364 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 PDCD4Q53EL6 469 aaKnown RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 HMBOX1Q6NT76 420 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 GPAT4Q86UL3 456 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 HIPK1Q86Z02 1210 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 ZIC4Q8N9L1 334 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 MGARPQ8TDB4 240 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 HTRA1Q92743 480 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 PIF1Q9H611 641 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 CACYBPQ9HB71 228 aaKnown RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 SLC6A13Q9NSD5 602 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
RAB4B-201ENST00000357052 ANK3Q12955 4377 aaKnown RBP12.96□□□□□ -0.33
RAB4B-201ENST00000357052 TMEM120BA0PK00 339 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 AQP7P3A6NL99 342 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 A8MV72 311 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 A8MVM7 634 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 H7C417 338 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 GPRIN2O60269 458 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 KRT33AO76009 404 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 IFNA2P01563 188 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 BCHEP06276 602 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 NCF2P19878 526 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 MVDP53602 400 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 DSTNP60981 165 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 CHRNB3Q05901 458 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 BNIP2Q12982 314 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ZSWIM7Q19AV6 140 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ATG16L1Q676U5 607 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 TMEM225Q6GV28 225 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ABHD12BQ7Z5M8 362 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 SLC38A5Q8WUX1 472 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ITCHQ96J02 903 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 TNFRSF13CQ96RJ3 184 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ARMC7Q9H6L4 198 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 RMND5AQ9H871 391 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 TPT1P8Q9HAU6 139 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ADPRHL2Q9NX46 363 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 THUMPD1Q9NXG2 353 aaKnown RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ZNF232Q9UNY5 417 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 ZNF443Q9Y2A4 671 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-201ENST00000357052 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
RAB4B-201ENST00000357052 YLPM1P49750 1951 aaKnown RBP12.94□□□□□ -0.34
RAB4B-201ENST00000357052 DSPPQ9NZW4 1301 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 A0A096LNT2 108 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ELOA3DA6NLF2 546 aaPredicted RBP12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ATP6V1G2-DDX39BF2Z307 99 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 VAMP5O95183 116 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 SLC25A16P16260 332 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
RAB4B-201ENST00000357052 TMEM249Q2WGJ8 235 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ELOA3BQ3SY89 546 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 CHRFAM7AQ494W8 412 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 HIKESHIQ53FT3 197 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 RNF220Q5VTB9 566 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 C1orf140Q5VVS0 124 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 MSANTD1Q6ZTZ1 278 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ZNF525Q8N782 197 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ELOA3Q8NG57 546 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 FAM168AQ92567 244 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 OBP2BQ9NPH6 170 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 TMEM45AQ9NWC5 275 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 ZIM2Q9NZV7 527 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 MALRD1Q5VYJ5 2156 aa12.94□□□□□ -0.34
RAB4B-201ENST00000357052 A0A096LPI6 279 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 HNRNPCL3B7ZW38 293 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 KLF11O14901 512 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 UBDO15205 165 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
RAB4B-201ENST00000357052 CSF3P09919 207 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 HNRNPCL4P0DMR1 293 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 PRG2P13727 222 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 EFNA4P52798 201 aa12.93□□□□□ -0.34
RAB4B-201ENST00000357052 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms