RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CLN6Q9NWW5 311 aa16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 RPH3AQ9Y2J0 694 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 TNRC6AQ8NDV7 1962 aaKnown RBP16.39■□□□□ 0.21
SMARCD3-202ENST00000356800 NME2P1O60361 137 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 ADRB1P08588 477 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 BMP7P18075 431 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 NME2P22392 152 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 PLA2G5P39877 138 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 EIF1P41567 113 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 ALDH3B2P48448 385 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 RPS4XP62701 263 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 OCLNQ16625 522 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 PGGHGQ32M88 737 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 C10orf53Q8N6V4 93 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 OR52L1Q8NGH7 329 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 ARL5BQ96KC2 179 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 DKKL1Q9UK85 242 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF337Q9Y3M9 751 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 CSAG2Q9Y5P2 127 aa16.38■□□□□ 0.21
SMARCD3-202ENST00000356800 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF208O43345 1280 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 PRKYO43930 277 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM20BO75063 409 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 HTR1AP08908 422 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ASAH2BP0C7U1 165 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ADH6P28332 368 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ARG2P78540 354 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 SNAPC1Q16533 368 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 MEDAGQ5VYS4 303 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC25A25Q6KCM7 469 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 TCEANCQ8N8B7 351 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF540Q8NDQ6 660 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ATP6V1C2Q8NEY4 427 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 SGCDQ92629 289 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 IL4I1Q96RQ9 567 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 NANSQ9NR45 359 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 FKBP14Q9NWM8 211 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 PSORS1C1Q9UIG5 152 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 BOKQ9UMX3 212 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 URB1O60287 2271 aaKnown RBP16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 LAMA5O15230 3695 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 CLCA1A8K7I4 914 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 BHLHE40O14503 412 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 HMGN1P05114 100 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 SRD5A2P31213 254 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 TNFSF10P50591 281 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 GALNTL5Q7Z4T8 443 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 LNX2Q8N448 690 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 SCMH1Q96GD3 660 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 FKRPQ9H9S5 495 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 ZNF229Q9UJW7 825 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 PCDHGB1Q9Y5G3 927 aa16.37■□□□□ 0.21
SMARCD3-202ENST00000356800 FTCDNL1E5RQL4 147 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 H3BML4 177 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SURF4O15260 269 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 TLX2O43763 284 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 PEPDP12955 493 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SHC1P29353 583 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 RFC3P40938 356 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 MAP2K6P52564 334 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 B3GALT5-AS1P59052 145 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 TLE3Q04726 772 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM69AQ5T7M9 428 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 C3orf33Q6P1S2 294 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 C5orf46Q6UWT4 87 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SPARTQ8N0X7 666 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 MOSPD2Q8NHP6 518 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 TMEM163Q8TC26 289 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SIGLEC11Q96RL6 698 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SMAD5Q99717 465 aaKnown RBP16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM192AQ9GZU8 254 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 TMEM185BQ9H7F4 350 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 SEC14L4Q9UDX3 406 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 BAIAP2Q9UQB8 552 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 HIF3AQ9Y2N7 669 aa16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 KLF13Q9Y2Y9 288 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-202ENST00000356800 OR2M5A3KFT3 312 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 ENTPD6O75354 484 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 AHSA1O95433 338 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 OPN1LWP04000 364 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 TSPAN19P0C672 248 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 IMPDH2P12268 514 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 CD46P15529 392 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 UQCRC1P31930 480 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 GRK5P34947 590 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 GTF2A1P52655 376 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 C19orf57Q0VDD7 668 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SELENBP1Q13228 472 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 TOMM20Q15388 145 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 NADK2Q4G0N4 442 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SYT14P1Q58G82 188 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 RAET1LQ5VY80 246 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC6A19Q695T7 634 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 KCTD8Q6ZWB6 473 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 YRDCQ86U90 279 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SATL1Q86VE3 508 aa16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 FAM83FQ8NEG4 500 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-202ENST00000356800 SLC25A36Q96CQ1 311 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms