RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 IQCHQ86VS3 1027 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 OR4D11Q8NGI4 311 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 OR10R2Q8NGX6 335 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ZNF461Q8TAF7 563 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 NUBPLQ8TB37 319 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 LCN9Q8WX39 176 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 MYEOVQ96EZ4 313 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 HSPA12BQ96MM6 686 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 NDUFAF3Q9BU61 184 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 MFRPQ9BY79 579 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ADAM19Q9H013 955 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 PTGES2Q9H7Z7 377 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 VPS29Q9UBQ0 182 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ZNF337Q9Y3M9 751 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 MYO10Q9HD67 2058 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3DA0A087WVF3 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3IA0A087WXS9 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3EA0A087X179 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3KA0A087X1G2 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3FA6NER0 549 aaPredicted RBP14.51□□□□□ -0.09
RTN3-205ENST00000356000 ANKRD61A6NGH8 418 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3LB9A6J9 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 AK1P00568 194 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 FGBP02675 491 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 CD5P06127 495 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 CRHP06850 196 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 SNRPCP09234 159 aaKnown RBP14.51□□□□□ -0.09
RTN3-205ENST00000356000 FAM157CP0CG43 387 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 MPIP34949 423 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 MAS1LP35410 378 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 PLA2G7Q13093 441 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 CBFBQ13951 182 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 DCAF4L1Q3SXM0 396 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ZNF385BQ569K4 471 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 C1orf53Q5VUE5 145 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3CQ6IPX1 549 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 DRAM2Q6UX65 266 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TBC1D3Q8IZP1 549 aaPredicted RBP14.51□□□□□ -0.09
RTN3-205ENST00000356000 SIRT6Q8N6T7 355 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 SLC30A7Q8NEW0 376 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 NUDCD2Q8WVJ2 157 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 FCRL4Q96PJ5 515 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TMEM248Q9NWD8 314 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ZNF214Q9UL59 606 aaPredicted RBP14.51□□□□□ -0.09
RTN3-205ENST00000356000 A4GNTQ9UNA3 340 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 TRPV2Q9Y5S1 764 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 A8MWP6 167 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 F8VVB4 439 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 F8VWA3 439 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 FLRT2O43155 660 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 RAB3DO95716 219 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 ANXA5P08758 320 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 MYOGP15173 224 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 GSK3AP49840 483 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 GABREP78334 506 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 LSM11P83369 360 aaKnown RBP eCLIP14.5□□□□□ -0.09
RTN3-205ENST00000356000 ACSM2AQ08AH3 577 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 VWA2Q5GFL6 755 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 SAPCD1Q5SSQ6 148 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 ACSM2BQ68CK6 577 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PTRHD1Q6GMV3 140 aaKnown RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 RTL10Q7L3V2 364 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 LRRC70Q7Z2Q7 622 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 ACBD7Q8N6N7 88 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 C19orf47Q8N9M1 422 aaKnown RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 CASD1Q96PB1 797 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 ATG101Q9BSB4 218 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 KRCC1Q9NPI7 259 aaPredicted RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 ZMIZ1Q9ULJ6 1067 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 SEC14L6B5MCN3 397 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 H7C1Q1 480 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PRAMEF4O60810 478 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 IL3P08700 152 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 EPHB3P54753 998 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PIN1Q13526 163 aaPredicted RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 ZNF750Q32MQ0 723 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PRAMEF9Q5VWM5 478 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 VITQ6UXI7 678 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 UNQ6126/PRO20091Q6UXV3 157 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 SYT9Q86SS6 491 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 FBXO16Q8IX29 292 aaPredicted RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 OR4K1Q8NGD4 311 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 LKAAEAR1Q8TD35 194 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 PIK3IP1Q96FE7 263 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 F2RL3Q96RI0 385 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 BHLHE41Q9C0J9 482 aaPredicted RBP14.5□□□□□ -0.09
RTN3-205ENST00000356000 IL21RQ9HBE5 538 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 RBPJLQ9UBG7 517 aa14.5□□□□□ -0.09
RTN3-205ENST00000356000 C7orf77A4D0Y5 90 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 ACOT7O00154 380 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 CRTAPO75718 401 aaPredicted RBP14.49□□□□□ -0.09
RTN3-205ENST00000356000 C6P13671 934 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 TPT1P13693 172 aaKnown RBP14.49□□□□□ -0.09
RTN3-205ENST00000356000 RHOQP17081 205 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 MSX1P28360 303 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 NSG1P42857 185 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 OAZ1P54368 228 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 ST8SIA6P61647 398 aa14.49□□□□□ -0.09
RTN3-205ENST00000356000 RAE1P78406 368 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms