RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 ECDO95905 644 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 SPI1P17947 270 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 SRMP19623 302 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 S1PR1P21453 382 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 HNRNPA2B1P22626 353 aaKnown RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 PSMD4P55036 377 aaKnown RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 VSX2P58304 361 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 AP3S2P59780 193 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 ILF3Q12906 894 aaKnown RBP eCLIP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 FAM53BQ14153 422 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 ALG11Q2TAA5 492 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 LINGO2Q7L985 606 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 PRSS45Q7RTY3 260 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 EID2Q8N6I1 236 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 NPEPL1Q8NDH3 523 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 OR4N2Q8NGD1 307 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 HEXA-AS1Q9H8Q6 139 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 COPS3Q9UNS2 423 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 IFITM5A6NNB3 132 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 EFCAB7A8K855 629 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 NPIPB9F8W1W9 429 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 PRAF2O60831 178 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 POU3F3P20264 500 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 PSMB10P40306 273 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 CAMK2DQ13557 499 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 IL10RAQ13651 578 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 FAM199XQ6PEV8 388 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 IZUMO1Q8IYV9 350 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 VSTM2LQ96N03 204 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 NMNAT3Q96T66 252 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 NMNAT2Q9BZQ4 307 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 SPRTNQ9H040 489 aaPredicted RBP16.72■□□□□ 0.27
SPNS3-201ENST00000355530 DLL4Q9NR61 685 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 HRASLS2Q9NWW9 162 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 ZNF337Q9Y3M9 751 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 NPTNQ9Y639 398 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 AUP1Q9Y679 476 aa16.72■□□□□ 0.27
SPNS3-201ENST00000355530 CDH23Q9H251 3354 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 ARHGEF17Q96PE2 2063 aaPredicted RBP16.71■□□□□ 0.27
SPNS3-201ENST00000355530 A0A087WUJ7 227 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.71■□□□□ 0.27
SPNS3-201ENST00000355530 NAP1L6A6NFF2 107 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 GABARAPH6UMI1 98 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 KHNYNO15037 678 aaKnown RBP16.71■□□□□ 0.27
SPNS3-201ENST00000355530 DNASE1P24855 282 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 CCR9P51686 369 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 BEST4Q8NFU0 473 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 OR6K6Q8NGW6 343 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 SUN5Q8TC36 379 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 RADILQ96JH8 1075 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 G6PC3Q9BUM1 346 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 MRI1Q9BV20 369 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 CCDC86Q9H6F5 360 aaKnown RBP16.71■□□□□ 0.27
SPNS3-201ENST00000355530 CPNE7Q9UBL6 633 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 ZNF281Q9Y2X9 895 aa16.71■□□□□ 0.27
SPNS3-201ENST00000355530 ICMTO60725 284 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 KLF8O95600 359 aaPredicted RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 TGM6O95932 706 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SYPP08247 313 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 ADRB1P08588 477 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 AP2S1P53680 142 aaPredicted RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 RPS4XP62701 263 aaKnown RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 ELFN2Q5R3F8 820 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SIGIRRQ6IA17 410 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 MTFR2Q6P444 385 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SLC35F3Q8IY50 421 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 ZNRF4Q8WWF5 429 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 PATE1Q8WXA2 126 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 NXPE2Q96DL1 559 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SLC25A38Q96DW6 304 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SORCS2Q96PQ0 1159 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 DDOQ99489 341 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 GFI1Q99684 422 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 KLHL9Q9P2J3 617 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 RCE1Q9Y256 329 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 OR6C68A6NDL8 312 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 PIN1P1O15428 100 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 HES5Q5TA89 166 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 OR8H3Q8N146 312 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 OR11G2Q8NGC1 345 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 OR9A4Q8NGU2 314 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 RIT1Q92963 219 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 GPX7Q96SL4 187 aaPredicted RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 RPP25Q9BUL9 199 aaKnown RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 ZNF436Q9C0F3 470 aaPredicted RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 SLC25A18Q9H1K4 315 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 CLEC4MQ9H2X3 399 aaPredicted RBP16.7■□□□□ 0.26
SPNS3-201ENST00000355530 Q9N2J8 555 aa16.7■□□□□ 0.26
SPNS3-201ENST00000355530 ACOD1A6NK06 481 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 SULT1B1O43704 296 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 OR7A10O76100 309 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 CSTAP01040 98 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 DPP4P27487 766 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 ZNF81P51508 661 aa16.69■□□□□ 0.26
SPNS3-201ENST00000355530 EPHA4P54764 986 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms