RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 NOTOA8MTQ0 251 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 TMEM150CB9EJG8 249 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 LRRN3E7EW58 273 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 ORC5O43913 435 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 EIF4EP06730 217 aaKnown RBP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 EPHA4P54764 986 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC37A1P57057 533 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 SF3B4Q15427 424 aaKnown RBP eCLIP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 OGFOD3Q6PK18 319 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 ATG4DQ86TL0 474 aaPredicted RBP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 OR51L1Q8NGJ5 315 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 PTPMT1Q8WUK0 201 aaPredicted RBP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 LRRN3Q9H3W5 708 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 LANCL2Q9NS86 450 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 NLKQ9UBE8 527 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A0B4J293 547 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 GPRIN2O60269 458 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 GLCEO94923 617 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 ALAS2P22557 587 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 NAA10P41227 235 aaPredicted RBP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 HNRNPKP61978 463 aaKnown RBP eCLIP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 MRPS15P82914 257 aaKnown RBP20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 TMEM53Q6P2H8 277 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 CADM4Q8NFZ8 388 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 PHOSPHO1Q8TCT1 267 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 RNF31Q96EP0 1072 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 MVB12AQ96EY5 273 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 OR1F2PQ96R84 312 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 NCDNQ9UBB6 729 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 HIF3AQ9Y2N7 669 aa20.35■□□□□ 0.85
NKX2-1-201ENST00000354822 IGKV1D-42A0A075B6H8 117 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 TRBV2A0A0J9YWF9 115 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 OR6C68A6NDL8 312 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 LMO7DNF2Z398 122 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 IMPA2O14732 288 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 FZD7O75084 574 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 ERVK-25P63136 954 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 SKP2Q13309 424 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 SMAD2Q15796 467 aaKnown RBP20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 OVCH1Q7RTY7 1134 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 NUP54Q7Z3B4 507 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 RFLNBQ8N5W9 214 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 HSPA12BQ96MM6 686 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 WACQ9BTA9 647 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 PNO1Q9NRX1 252 aaKnown RBP20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 CUTCQ9NTM9 273 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 GNG8Q9UK08 70 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 KNL1Q8NG31 2342 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 FLRT2O43155 660 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 ZNF264O43296 627 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 UCHL1P09936 223 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 LCN1P31025 176 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 CCDC85BQ15834 202 aaPredicted RBP20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 ZNF74Q16587 644 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 TMEM151BQ8IW70 566 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 CREB3L1Q96BA8 519 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 C12orf10Q9HB07 376 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 NANSQ9NR45 359 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 TEKT2Q9UIF3 430 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 MOKQ9UQ07 419 aa20.34■□□□□ 0.85
NKX2-1-201ENST00000354822 ANKRD61A6NGH8 418 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 FRG2CA6NGY1 282 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 CD14P08571 375 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 SPTBP11277 2137 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC25A1P53007 311 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC25A35Q3KQZ1 300 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 C14orf28Q4W4Y0 310 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 BICRALQ6AI39 1079 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 TIGD3Q6B0B8 471 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 IL20RBQ6UXL0 311 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 CARFQ8N187 725 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 DEFB119Q8N690 84 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 LCORQ96JN0 433 aaPredicted RBP20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 YIPF2Q9BWQ6 316 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 NDEL1Q9GZM8 345 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 MRPS17Q9Y2R5 130 aaKnown RBP20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 CLCA3PQ9Y6N3 262 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 MAU2Q9Y6X3 613 aa20.33■□□□□ 0.85
NKX2-1-201ENST00000354822 RHPN2P1A8MT19 583 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 A8MV72 311 aaPredicted RBP20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 UTS2O95399 124 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 YES1P07947 543 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 EDNRAP25101 427 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 PITPNAQ00169 270 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 CD226Q15762 336 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 UNQ9370/PRO34162Q6UXP9 181 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 NOXA1Q86UR1 476 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 OR6K6Q8NGW6 343 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 DMRTB1Q96MA1 342 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 RANGRFQ9HD47 186 aaPredicted RBP20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 RPRD1BQ9NQG5 326 aaKnown RBP20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 THADAQ6YHU6 1953 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF879B4DU55 563 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 BLOC1S5-TXNDC5H3BN57 136 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 EPXP11678 715 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 AHCYP23526 432 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 DCAF7P61962 342 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 KCTD20Q7Z5Y7 419 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 JAZF1Q86VZ6 243 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 TCTE3Q8IZS6 198 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms