RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ANKRD60Q9BZ19 345 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 B3GAT2Q9NPZ5 323 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 FAM120CQ9NX05 1096 aaKnown RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 MLXQ9UH92 298 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ABCG2Q9UNQ0 655 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 OARD1Q9Y530 152 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 DDX49Q9Y6V7 483 aaKnown RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 MYO18BQ8IUG5 2567 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 DNAH12Q6ZR08 3092 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 CNTNAP2Q9UHC6 1331 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 C2CD3Q4AC94 2353 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 TJP1Q07157 1748 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 A0A0G2JLM5 398 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 TCRBV9S1A1TA0A576 114 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF840PA6NDX5 716 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 NKX6-3A6NJ46 265 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 SPECC1L-ADORA2AF8WAN1 911 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 M0QX08 132 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ZBTB5O15062 677 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 CASC3O15234 703 aaKnown RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 INPP4BO15327 924 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PFKFB2O60825 505 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 N4BP1O75113 896 aaKnown RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PIGRP01833 764 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 FCGR3AP08637 254 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 HBQ1P09105 142 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC130P13994 396 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PAX1P15863 534 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PSMA2P25787 234 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 CHRNB4P30926 498 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 SLC1A4P43007 532 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP1-1Q07627 177 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 NCBP1Q09161 790 aaKnown RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 LTB4RQ15722 352 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 SSX2Q16385 188 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 DUSP7Q16829 419 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 LEMD1Q68G75 181 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 SLC35E4Q6ICL7 350 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 NAXDQ8IW45 347 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PRR22Q8IZ63 422 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 SAMD12Q8N8I0 201 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ZFP41Q8N8Y5 198 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ACOT4Q8N9L9 421 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 OR4F6Q8NGB9 312 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 FNDC8Q8TC99 324 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ACMSDQ8TDX5 336 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 MAIP1Q8WWC4 291 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 C20orf24Q9BUV8 137 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 PKIBQ9C010 78 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 NMUR1Q9HB89 426 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF334Q9HCZ1 680 aaPredicted RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 RIMS3Q9UJD0 308 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 NPTNQ9Y639 398 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 RPAP1Q9BWH6 1393 aaPredicted RBP1.33□□□□□ -2.2
BRCA1-202ENST00000354071 TSC2P49815 1807 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 FYCO1Q9BQS8 1478 aa1.33□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1B0GU03 582 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF705EA8MWA4 302 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C11orf98E9PRG8 122 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MBTPS2O43462 519 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF254O75437 659 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 STAMBPO95630 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 IGKV2-30P06310 120 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HTR1FP30939 366 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BTCP35070 178 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 RPL13AP40429 203 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 THBS3P49746 956 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SLC7A2P52569 658 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ACLYP53396 1101 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SLAQ13239 276 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CYLC2Q14093 348 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF146Q15072 292 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF829Q3KNS6 432 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C1orf189Q5VU69 101 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FRRS1Q6ZNA5 592 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PGAP1Q75T13 922 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 Q8N9G6 341 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 LRRC75AQ8NAA5 344 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR6T1Q8NGN1 323 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CD300LFQ8TDQ1 290 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CRYGNQ8WXF5 182 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PGLYRP2Q96PD5 576 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 KCNA7Q96RP8 456 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CHIAQ9BZP6 476 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ELOVL6Q9H5J4 265 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF556Q9HAH1 456 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PXMP2Q9NR77 195 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 THUMPD1Q9NXG2 353 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 LSM7Q9UK45 103 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NBEAQ8NFP9 2946 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BRD4O60885 1362 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C9orf84Q5VXU9 1444 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 UBR1Q8IWV7 1749 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PPIAL4EA0A075B759 164 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1B0GW55 424 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF99A8MXY4 864 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BCKDKO14874 412 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms