RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 K7EQS6 105 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 NRG2O14511 850 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 GPR3P46089 330 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 MAN2A2P49641 1150 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 P2RY14Q15391 338 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 NTRK2Q16620 822 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 CPEB2Q7Z5Q1 589 aaKnown RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 KMT5CQ86Y97 462 aa13.76□□□□□ -0.21
COL17A1-201ENST00000353479 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
COL17A1-201ENST00000353479 TMEM72A0PK05 275 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 MUCL1Q96DR8 90 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 POU2F2P09086 479 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 FOXK2Q01167 660 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 PLCXD3Q63HM9 321 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ANKRD53Q8N9V6 530 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
COL17A1-201ENST00000353479 MED17Q9NVC6 651 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 KLHL13Q9P2N7 655 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 PLSCR5A0PG75 271 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 KCNK2O95069 426 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ARRB2P32121 409 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 SLC26A5P58743 744 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 COL28A1Q2UY09 1125 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 C1orf140Q5VVS0 124 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 OR5L1Q8NGL2 311 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ASB12Q8WXK4 309 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 GABRG3Q99928 467 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 SLC25A37Q9NYZ2 338 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 B3GNT3Q9Y2A9 372 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 H2AFB2P0C5Z0 115 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 SPOCK1Q08629 439 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 CRMP1Q14194 572 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 C1orf210Q8IVY1 113 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 TP63Q9H3D4 680 aaPredicted RBP13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF224Q9NZL3 707 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 CORINQ9Y5Q5 1042 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 EIF4E2O60573 245 aaKnown RBP13.75□□□□□ -0.21
COL17A1-201ENST00000353479 EIF1BO60739 113 aaKnown RBP13.75□□□□□ -0.21
COL17A1-201ENST00000353479 AMY2AP04746 511 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 SERPINA5P05154 406 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 BMP4P12644 408 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 MPLP40238 635 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 P2RX1P51575 399 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ILKQ13418 452 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 OR5H2Q8NGV7 314 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 OR5J2Q8NH18 312 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ITFG2Q969R8 447 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 EID2BQ96D98 161 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF845Q96IR2 970 aaPredicted RBP13.75□□□□□ -0.21
COL17A1-201ENST00000353479 OLAHQ9NV23 265 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 DNAJB11Q9UBS4 358 aa13.75□□□□□ -0.21
COL17A1-201ENST00000353479 YES1P07947 543 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 NID1P14543 1247 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
COL17A1-201ENST00000353479 PIGCQ92535 297 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 CSF3RQ99062 836 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 IGLV3-16A0A075B6K0 115 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 OR2W5A6NFC9 320 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF195O14628 629 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 OR7A10O76100 309 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 AKR1C4P17516 323 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 FPR3P25089 353 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 TEAD1P28347 426 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 SPEM2Q0P670 501 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 HYAL4Q2M3T9 481 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 GRINAQ7Z429 371 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 NKAIN4Q8IVV8 208 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 PRR18Q8N4B5 295 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 CSNK2A3Q8NEV1 391 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 C16orf52Q8NHV5 167 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF582Q96NG8 517 aaPredicted RBP13.74□□□□□ -0.21
COL17A1-201ENST00000353479 SYT4Q9H2B2 425 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 SLC6A15Q9H2J7 730 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 HIF3AQ9Y2N7 669 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 R4GN57 208 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 H3BUI4 141 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 LGI1O95970 557 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ARSBP15848 533 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ACTBP60709 375 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ACTG1P63261 375 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 FAM53BQ14153 422 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 DPY19L2P2Q6ZN68 376 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 SERPINA12Q8IW75 414 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 SLC35F3Q8IY50 421 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
COL17A1-201ENST00000353479 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ADAM18Q9Y3Q7 739 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 CD160O95971 181 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 TPOP07202 933 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 DBHP09172 617 aa13.74□□□□□ -0.21
COL17A1-201ENST00000353479 GUSBP11Q6P575 273 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms