RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PRAF2O60831 178 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 PVRP15151 417 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 SSTR2P30874 369 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 LSSP48449 732 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 SELENOPP49908 381 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 GPR18Q14330 331 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 CLLU1Q5K131 121 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 ELFN2Q5R3F8 820 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 ULK3Q6PHR2 472 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 NLRC3Q7RTR2 1065 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 C7orf57Q8NEG2 295 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 TSACCQ96A04 125 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-202ENST00000352393 SGTBQ96EQ0 304 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 WDR92Q96MX6 357 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 DDOQ99489 341 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 POT1Q9NUX5 634 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 IFITM5A6NNB3 132 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 H0Y8X5 98 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 K7EQS6 105 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 IFNA7P01567 189 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 ENPP1P22413 925 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 DPP4P27487 766 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 VSX2P58304 361 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-202ENST00000352393 FAM53BQ14153 422 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 HES5Q5TA89 166 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 RNF44Q7L0R7 432 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 NPEPL1Q8NDH3 523 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 ORAI1Q96D31 301 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 LCORQ96JN0 433 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-202ENST00000352393 NMNAT2Q9BZQ4 307 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 SLC25A18Q9H1K4 315 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 CLEC4MQ9H2X3 399 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-202ENST00000352393 NARFLQ9H6Q4 476 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 C2orf42Q9NWW7 574 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 NKIRAS2Q9NYR9 191 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 AKAP7Q9P0M2 348 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-202ENST00000352393 FLVCR2Q9UPI3 526 aa22.49■■□□□ 1.19
CPNE1-202ENST00000352393 GABARAPH6UMI1 98 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 PDCD5O14737 125 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 ITGA10O75578 1167 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 PDGFAP04085 211 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 POU4F3Q15319 338 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 SLC35D3Q5M8T2 416 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 SFRP4Q6FHJ7 346 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 OR2T35Q8NGX2 323 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 OR52I2Q8NH67 350 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 BAHD1Q8TBE0 780 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 PHOSPHO2Q8TCD6 241 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 ASB12Q8WXK4 309 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 GCDHQ92947 438 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 MRPL48Q96GC5 212 aaKnown RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 MKKSQ9NPJ1 570 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 MRPL15Q9P015 296 aaKnown RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 TEX51A0A1B0GUA7 166 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 NAP1L6A6NFF2 107 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 ACOD1A6NK06 481 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 GNB5O14775 395 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 ECDO95905 644 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 SPI1P17947 270 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 PSMB1P20618 241 aaKnown RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 DPY19L2P2Q6ZN68 376 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 IDO2Q6ZQW0 420 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 FAM71CQ8NEG0 241 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 OR4N2Q8NGD1 307 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 ZPLD1Q8TCW7 415 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 RGP1Q92546 391 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 HSPA12BQ96MM6 686 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 RBP7Q96R05 134 aa22.48■■□□□ 1.19
CPNE1-202ENST00000352393 METTL17Q9H7H0 456 aaPredicted RBP22.48■■□□□ 1.19
CPNE1-202ENST00000352393 EML5Q05BV3 1969 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 A0A1B0GUH1 482 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 IMPA2O14732 288 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 SLC35E2P0CK97 266 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 S1PR1P21453 382 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 PUDPQ08623 228 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 ZSWIM7Q19AV6 140 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 TMEM196Q5HYL7 178 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 Q6ZTK2 550 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 ZNF550Q7Z398 422 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 EID2Q8N6I1 236 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 NMNAT3Q96T66 252 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 KXD1Q9BQD3 176 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.47■■□□□ 1.19
CPNE1-202ENST00000352393 UBQLN2Q9UHD9 624 aa22.47■■□□□ 1.19
CPNE1-202ENST00000352393 LOC105371267A0A1B0GV96 52 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 TMEM127O75204 238 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 VEGFCP49767 419 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 GPR143P51810 404 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 RAB38P57729 211 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 ZNF141Q15928 474 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 SMUG1Q53HV7 270 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 RNF166Q96A37 237 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-202ENST00000352393 KLHL9Q9P2J3 617 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 KCNN3Q9UGI6 736 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 ZNF281Q9Y2X9 895 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 ARHGEF17Q96PE2 2063 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-202ENST00000352393 OR6C68A6NDL8 312 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 B8ZZF3 427 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 NPIPB9F8W1W9 429 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 ARPC3O15145 178 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms