RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 THBS1P07996 1170 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 ZNF250P15622 560 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 PGDP52209 483 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 SLC3A1Q07837 685 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 NPSR1Q6W5P4 371 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 CEACAM19Q7Z692 300 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 OR51Q1Q8NH59 317 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 DACT3Q96B18 629 aaPredicted RBP19.54■□□□□ 0.72
PTPN18-202ENST00000347849 MS4A3Q96HJ5 214 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 UBQLN3Q9H347 655 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 DBIP07108 87 aaKnown RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 F8A1P23610 371 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 OR1D4P47884 311 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 SLC25A35Q3KQZ1 300 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 KLHL12Q53G59 568 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 ZCCHC12Q6PEW1 402 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 TOMM5Q8N4H5 51 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 ZNF614Q8N883 585 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 OR10H4Q8NGA5 316 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 HOXB13Q92826 284 aaPredicted RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 ZFP3Q96NJ6 502 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 SMAD5Q99717 465 aaKnown RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 COQ3Q9NZJ6 369 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 SIT1Q9Y3P8 196 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 IGHV1OR21-1A0A087WYE8 117 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 CD1CP29017 333 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 CCR6P51684 374 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 AFF3P51826 1226 aaKnown RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 PYHIN1Q6K0P9 492 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 MBOAT2Q6ZWT7 520 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 NR4A3Q92570 626 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 CNOT9Q92600 299 aaKnown RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 KCTD12Q96CX2 325 aaKnown RBP19.53■□□□□ 0.72
PTPN18-202ENST00000347849 VSTM2LQ96N03 204 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 NLGN3Q9NZ94 848 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 NUBP2Q9Y5Y2 271 aa19.53■□□□□ 0.72
PTPN18-202ENST00000347849 H3BMH7 237 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 KLF4O43474 513 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 OR5F1O95221 314 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 CSF2RBP32927 897 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 SLC16A1P53985 500 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 E2F1Q01094 437 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 BDH1Q02338 343 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 LGALSLQ3ZCW2 172 aaPredicted RBP19.52■□□□□ 0.72
PTPN18-202ENST00000347849 CD276Q5ZPR3 534 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 SIAH3Q8IW03 269 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 MARVELD3Q96A59 401 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 SORCS2Q96PQ0 1159 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 HCAR1Q9BXC0 346 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 CACNG6Q9BXT2 260 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 TRIM36Q9NQ86 728 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 DHCR7Q9UBM7 475 aaKnown RBP19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ERVK-19Q9WJR5 959 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ARID1BQ8NFD5 2236 aaPredicted RBP19.52■□□□□ 0.72
PTPN18-202ENST00000347849 LYPD3O95274 346 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 IGLV3-21P80748 117 aaPredicted RBP19.52■□□□□ 0.72
PTPN18-202ENST00000347849 OR1Q1Q15612 314 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 CDONQ4KMG0 1287 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 TTLL10Q6ZVT0 673 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 MEPCEQ7L2J0 689 aaKnown RBP19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ZNF595Q8IYB9 648 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ABHD4Q8TB40 342 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 JAM3Q9BX67 310 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ENKD1Q9H0I2 346 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 ANKRD19PQ9H560 264 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 BEX1Q9HBH7 125 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 C20orf141Q9NUB4 165 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 WDFY3Q8IZQ1 3526 aa19.52■□□□□ 0.72
PTPN18-202ENST00000347849 TEX51A0A1B0GUA7 166 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 A0A1W2PPC1 479 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 ZGLP1P0C6A0 271 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 GPR3P46089 330 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 ZNF81P51508 661 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 SHBQ15464 509 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 RCBTB1Q8NDN9 531 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 PFN4Q8NHR9 129 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 SMAP2Q8WU79 429 aaPredicted RBP19.51■□□□□ 0.71
PTPN18-202ENST00000347849 ZDHHC12Q96GR4 267 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 AHCYL2Q96HN2 611 aaKnown RBP19.51■□□□□ 0.71
PTPN18-202ENST00000347849 OR2M2Q96R28 347 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 CACYBPQ9HB71 228 aaKnown RBP19.51■□□□□ 0.71
PTPN18-202ENST00000347849 UNC13CQ8NB66 2214 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 ACVR1BP36896 505 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 COL28A1Q2UY09 1125 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 MTFR2Q6P444 385 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 ZNF321PQ8N8H1 164 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 DGAT2Q96PD7 388 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 LMF1Q96S06 567 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 LMF2Q9BU23 707 aaKnown RBP19.51■□□□□ 0.71
PTPN18-202ENST00000347849 FSCN3Q9NQT6 498 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 EPHA6Q9UF33 1036 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 TMEM5Q9Y2B1 443 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 SEC16AO15027 2179 aa19.51■□□□□ 0.71
PTPN18-202ENST00000347849 PDGFBP01127 241 aaPredicted RBP19.5■□□□□ 0.71
PTPN18-202ENST00000347849 MRPL3P09001 348 aaKnown RBP19.5■□□□□ 0.71
PTPN18-202ENST00000347849 EFNA3P52797 238 aa19.5■□□□□ 0.71
PTPN18-202ENST00000347849 RPS7P62081 194 aaKnown RBP19.5■□□□□ 0.71
PTPN18-202ENST00000347849 SNTA1Q13424 505 aa19.5■□□□□ 0.71
PTPN18-202ENST00000347849 CAMK2DQ13557 499 aa19.5■□□□□ 0.71
PTPN18-202ENST00000347849 ST3GAL2Q16842 350 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms