RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF454Q8N9F8 522 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 GAREM1Q9H706 876 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 RASD1Q9Y272 281 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MMACHCQ9Y4U1 282 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 LRRC30A6NM36 301 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 PIP5K1CO60331 668 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 RAB6AP20340 208 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 C17orf67Q0P5P2 114 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MLLT11Q13015 90 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 SGPP1Q9BX95 441 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MMP28Q9H239 520 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 LIN7BQ9HAP6 207 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 PRSS16Q9NQE7 514 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 TM7SF3Q9NS93 570 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MED17Q9NVC6 651 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 GNG12Q9UBI6 72 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 A8MVM7 634 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 CHRNB1P11230 501 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 PRAMEF20Q5VT98 475 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 HEPHL1Q6MZM0 1159 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 RBMXL3Q8N7X1 1067 aaKnown RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 ACKR4Q9NPB9 350 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 BIN3Q9NQY0 253 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 ABHD11Q8NFV4 315 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 ELP4Q96EB1 424 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 MCOLN1Q9GZU1 580 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 IVDP26440 423 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 EIF1P41567 113 aaKnown RBP21.49■■□□□ 1.03
NPAS3-201ENST00000346562 C3orf58Q8NDZ4 430 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 AGPAT4Q9NRZ5 378 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 GABARAPH6UMI1 98 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 GABARAPO95166 117 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 SNCAP37840 140 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 ARL16Q0P5N6 197 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 TSPAN31Q12999 210 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 OR7G1Q8NGA0 311 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 USP3Q9Y6I4 520 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 PRKAR1BP31321 381 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 GJA5P36382 358 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 SIRPAP78324 504 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 LCORQ96JN0 433 aaPredicted RBP21.49■■□□□ 1.03
NPAS3-201ENST00000346562 SEMA6CQ9H3T2 930 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A6P0DMU7 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A5P0DMU8 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A7P0DMV0 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A8P0DMV1 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A9P0DMV2 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 LGALS4P56470 323 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A2Q5DJT8 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A1Q5HYN5 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 CT45A3Q8NHU0 189 aa21.49■■□□□ 1.03
NPAS3-201ENST00000346562 SAV1Q9H4B6 383 aaPredicted RBP21.49■■□□□ 1.03
NPAS3-201ENST00000346562 GPR39O43194 453 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 DPP4P27487 766 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 OR13C2Q8NGS9 318 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 AGPAT2O15120 278 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 GPRIN2O60269 458 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 UTS2O95399 124 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 SSTP61278 116 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 SLC10A1Q14973 349 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 SSX2Q16385 188 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 HBMQ6B0K9 141 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 DUSP19Q8WTR2 217 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 NXPE3Q969Y0 559 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 SORT1Q99523 831 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 RPH3ALQ9UNE2 315 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 H3BMQ9 156 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 BET1O15155 118 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 TUSC2O75896 110 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 KCNK2O95069 426 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 REEP5Q00765 189 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 MS4A2Q01362 244 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 FGFBP1Q14512 234 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 MSTNO14793 375 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 MED6O75586 246 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 UBBP0CG47 229 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 UBCP0CG48 685 aaKnown RBP21.48■■□□□ 1.03
NPAS3-201ENST00000346562 MAGEA6P43360 314 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 RPS27AP62979 156 aaKnown RBP21.48■■□□□ 1.03
NPAS3-201ENST00000346562 UBA52P62987 128 aaKnown RBP21.48■■□□□ 1.03
NPAS3-201ENST00000346562 CMPK2Q5EBM0 449 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 LUZP4Q9P127 313 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 NALCNQ8IZF0 1738 aa21.48■■□□□ 1.03
NPAS3-201ENST00000346562 HCRTR1O43613 425 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 CCL11P51671 97 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 EXT1Q16394 746 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF691Q5VV52 312 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 CMIPQ8IY22 773 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 ATP13A2Q9NQ11 1180 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 TMED7-TICAM2A0A0A6YYA0 188 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 OR7C1O76099 320 aaPredicted RBP21.47■■□□□ 1.03
NPAS3-201ENST00000346562 HLA-AP01891 365 aaKnown RBP21.47■■□□□ 1.03
NPAS3-201ENST00000346562 ARAFP10398 606 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 HYAL4Q2M3T9 481 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 TANGO2Q6ICL3 276 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 LPCAT3Q6P1A2 487 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 LINC00696Q6ZRV3 163 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 TMEM185AQ8NFB2 350 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 HHIPL1Q96JK4 782 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms