RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 A0A0U1RQK1 487 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 MBLAC1A4D2B0 266 aaPredicted RBP16.26■□□□□ 0.19
SPAST-202ENST00000345662 A8MXE2 369 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 STK17BO94768 372 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 RHOP08100 348 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 HTR2CP28335 458 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 EVX1P49640 407 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
SPAST-202ENST00000345662 SLC22A6Q4U2R8 563 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 USP51Q70EK9 711 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 DPPA4Q7L190 304 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 SAMD10Q9BYL1 202 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 SLIRPQ9GZT3 109 aaKnown RBP16.26■□□□□ 0.19
SPAST-202ENST00000345662 CERS4Q9HA82 394 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 SLC6A20Q9NP91 592 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 SLC25A37Q9NYZ2 338 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 INSL6Q9Y581 213 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 WIF1Q9Y5W5 379 aa16.26■□□□□ 0.19
SPAST-202ENST00000345662 OR2T1O43869 369 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 SLC16A7O60669 478 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 RNGTTO60942 597 aaKnown RBP16.25■□□□□ 0.19
SPAST-202ENST00000345662 FOXK2Q01167 660 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 ACY1Q03154 408 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 OR7E24Q6IFN5 339 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 COX15Q7KZN9 410 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TECPR1Q7Z6L1 1165 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 MIB2Q96AX9 1013 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 MACROD1Q9BQ69 325 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 ANKRD19PQ9H560 264 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 PLEKHA3Q9HB20 300 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 PDE7BQ9NP56 450 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 UFSP2Q9NUQ7 469 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 LHX3Q9UBR4 397 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 SCGB1D1O95968 90 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 CRMP1Q14194 572 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 OPALINQ96PE5 141 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 KATNB1Q9BVA0 655 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TMEM100Q9NV29 134 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 PPT2Q9UMR5 302 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 UNCXA6NJT0 531 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 ZAR1LA6NP61 321 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 EFCAB7A8K855 629 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 NUDT19A8MXV4 375 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 HSBP1L1C9JCN9 74 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 HOXD9P28356 352 aaPredicted RBP16.25■□□□□ 0.19
SPAST-202ENST00000345662 HOXC13P31276 330 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 PER3P56645 1201 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 SLCO4C1Q6ZQN7 724 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 BBS1Q8NFJ9 593 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 OR6T1Q8NGN1 323 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 DOK1Q99704 481 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TGIF2Q9GZN2 237 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TMEM72A0PK05 275 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 CBR1P16152 277 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 IMPA1P29218 277 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 EMP3P54852 163 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TMEM179BQ7Z7N9 219 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 CCDC190Q86UF4 302 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TMEM68Q96MH6 324 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
SPAST-202ENST00000345662 TPOP07202 933 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 HOXB9P17482 250 aaPredicted RBP16.24■□□□□ 0.19
SPAST-202ENST00000345662 CMIPQ8IY22 773 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 ANKRD53Q8N9V6 530 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 OR2A12Q8NGT7 310 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 YIPF5Q969M3 257 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 ZDHHC12Q96GR4 267 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 OCSTAMPQ9BR26 566 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 OR52A5Q9H2C5 316 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 FBRSQ9HAH7 460 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TNFRSF12AQ9NP84 129 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 C1orf123Q9NWV4 160 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 KCMF1Q9P0J7 381 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 GPR34Q9UPC5 381 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TNFSF12O43508 249 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 S100A8P05109 93 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 SRMP19623 302 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 CDK3Q00526 305 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 ADAM5Q6NVV9 412 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 KCNIP4Q6PIL6 250 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 NAA11Q9BSU3 229 aaPredicted RBP16.24■□□□□ 0.19
SPAST-202ENST00000345662 HHATLQ9HCP6 504 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 SAGE1Q9NXZ1 904 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 MOKQ9UQ07 419 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 HTD2P86397 168 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TEX261Q6UWH6 196 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 LIX1LQ8IVB5 337 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TSTD1Q8NFU3 115 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 FAM213BQ8TBF2 198 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 THAP3Q8WTV1 239 aaPredicted RBP16.24■□□□□ 0.19
SPAST-202ENST00000345662 ALG12Q9BV10 488 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 KPTNQ9Y664 436 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 U3KQ87 197 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TMEM200CA6NKL6 621 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 AGAP14A8MT82 685 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 NAT1P18440 290 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 ACSM1Q08AH1 577 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms