RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 C9orf131Q5VYM1 1079 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ZNRF4Q8WWF5 429 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 FBXO17Q96EF6 278 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 PTDSS2Q9BVG9 487 aa13.69□□□□□ -0.22
CLCN1-201ENST00000343257 ARID1AO14497 2285 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 TCF20Q9UGU0 1960 aaKnown RBP13.68□□□□□ -0.22
CLCN1-201ENST00000343257 A0A1B0GTH9 108 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 MPTX1A8MV57 137 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 SLC25A12O75746 678 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 GTF2F2P13984 249 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 SRSF3P84103 164 aaKnown RBP13.68□□□□□ -0.22
CLCN1-201ENST00000343257 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 PRRT3Q5FWE3 981 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 LCTLQ6UWM7 567 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 BAIAP2L2Q6UXY1 529 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 GAREM2Q75VX8 874 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 RAB11FIP2Q7L804 512 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
CLCN1-201ENST00000343257 BPIFA2Q96DR5 249 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 CMC2Q9NRP2 79 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 FBXO34Q9NWN3 711 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 SLC23A2Q9UGH3 650 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF254O75437 659 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 AIFM1O95831 613 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 APOC1P02654 83 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 HTR2AP28223 471 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 CALCRP30988 508 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 PWWP2BQ6NUJ5 590 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 FAM111BQ6SJ93 734 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 RBMS3Q6XE24 437 aaKnown RBP13.68□□□□□ -0.22
CLCN1-201ENST00000343257 OR2W3Q7Z3T1 314 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 TMPRSS12Q86WS5 348 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 PRSS27Q9BQR3 290 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 NDRG3Q9UGV2 375 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 PCDHB10Q9UN67 800 aa13.68□□□□□ -0.22
CLCN1-201ENST00000343257 MKI67P46013 3256 aaKnown RBP13.68□□□□□ -0.22
CLCN1-201ENST00000343257 CXCL14O95715 111 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 RD3LP0DJH9 198 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 CYBAP13498 195 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 TYRP14679 529 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 CNR1P21554 472 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 NFYBP25208 207 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 EPHB3P54753 998 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 PPP2CBP62714 309 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 PPP2CAP67775 309 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 BLOC1S1P78537 153 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 TMEM215Q68D42 235 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 LNX2Q8N448 690 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 THAP6Q8TBB0 222 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SETD7Q8WTS6 366 aaKnown RBP13.67□□□□□ -0.22
CLCN1-201ENST00000343257 PDCD10Q9BUL8 212 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 JAM3Q9BX67 310 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 BIN3Q9NQY0 253 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 V9GY05 133 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 C5orf42Q9H799 3197 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SNRPGP15A8MWD9 76 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 LEFTY2O00292 366 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SULT1C2O00338 296 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SYT5O00445 386 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 PEX12O00623 359 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLCN1-201ENST00000343257 RBBP9O75884 186 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 ELNP15502 786 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF3P17036 446 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 BDKRB2P30411 391 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 OR1Q1Q15612 314 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 OTPQ5XKR4 325 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SLC36A1Q7Z2H8 476 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 BEST3Q8N1M1 668 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 TRAV14DV4A0A0A6YYC5 116 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 EMC8O43402 210 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 CRYBA1P05813 215 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 CSNK2A2P19784 350 aaPredicted RBP13.67□□□□□ -0.22
CLCN1-201ENST00000343257 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
CLCN1-201ENST00000343257 CDK20Q8IZL9 346 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 GJD3Q8N144 294 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 OR6K3Q8NGY3 331 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 SLC25A32Q9H2D1 315 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 RASL12Q9NYN1 266 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF337Q9Y3M9 751 aa13.67□□□□□ -0.22
CLCN1-201ENST00000343257 HEATR5BQ9P2D3 2071 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 A0A0A6YYD5 115 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 OR6C76A6NM76 312 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ACOT7O00154 380 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 LILRB5O75023 590 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 PAK4O96013 591 aaPredicted RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 IL5P05113 134 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 TMEM71Q6P5X7 295 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 USP50Q70EL3 339 aaPredicted RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms