RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ATP12AP54707 1039 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 TNFRSF17Q02223 184 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 MLLT11Q13015 90 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 PUM1Q14671 1186 aaKnown RBP eCLIP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 NR0B2Q15466 257 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 C1orf189Q5VU69 101 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 RBM45Q8IUH3 476 aaKnown RBP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 BMPERQ8N8U9 685 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 ZNF454Q8N9F8 522 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 BVESQ8NE79 360 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 SFT2D1Q8WV19 159 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 MMABQ96EY8 250 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 C16orf58Q96GQ5 468 aa13.88□□□□□ -0.19
BRAT1-201ENST00000340611 ERMAPQ96PL5 475 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-201ENST00000340611 SEC14L5O43304 696 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 CHST10O43529 356 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 LANCL1O43813 399 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 HCN1O60741 890 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ALDOBP05062 364 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PPP2R1BP30154 601 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 RPL3P39023 403 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 XKP51811 444 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 HMGA2P52926 109 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 RBBP4Q09028 425 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 NCF4Q15080 339 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PABPC1L2AQ5JQF8 200 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 C9orf152Q5JTZ5 239 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SLC23A3Q6PIS1 610 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 B3GLCTQ6Y288 498 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PLXDC1Q8IUK5 500 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 CA13Q8N1Q1 262 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PROKR2Q8NFJ6 384 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 OR52N2Q8NGI0 321 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 OR1L3Q8NH93 324 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DMRTA2Q96SC8 542 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 TMEM43Q9BTV4 400 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PMS2P1A4D2B8 440 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 URADA6NGE7 173 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 OSMP13725 252 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DRD2P14416 443 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 GSTM5P46439 218 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SRP9P49458 86 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SSTP61278 116 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 IKZF1Q13422 519 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PRTGQ2VWP7 1150 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 NHLRC3Q5JS37 347 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SHFQ7M4L6 423 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 CREB3L1Q96BA8 519 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ZC3HAV1LQ96H79 300 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DDOQ99489 341 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ADAT1Q9BUB4 502 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SAP130Q9H0E3 1048 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 METTL17Q9H7H0 456 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ZCCHC3Q9NUD5 404 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 LHX6Q9UPM6 363 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DTX4Q9Y2E6 619 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 RPL36Q9Y3U8 105 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 CNOT1A5YKK6 2376 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ANXA2P2A6NMY6 339 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 HTR3BO95264 441 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 BUD31P41223 144 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 EPHA4P54764 986 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 BTG2P78543 158 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DEF8Q6ZN54 512 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DGAT2L6Q6ZPD8 337 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 C6orf120Q7Z4R8 191 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 MEX3DQ86XN8 651 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 IFI44Q8TCB0 444 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 GATAD2BQ8WXI9 593 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ZNF681Q96N22 645 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 SLC38A2Q96QD8 506 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 DUSP23Q9BVJ7 150 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 NKX6-2Q9C056 277 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ABCG5Q9H222 651 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 PURGQ9UJV8 347 aaKnown RBP13.87□□□□□ -0.19
BRAT1-201ENST00000340611 ENTPD4Q9Y227 616 aa13.87□□□□□ -0.19
BRAT1-201ENST00000340611 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 STMND1H3BQB6 276 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 PRKYO43930 277 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 SELENOFO60613 162 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 SEMA7AO75326 666 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 LCN1P31025 176 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 SNRPGP62308 76 aaKnown RBP13.86□□□□□ -0.19
BRAT1-201ENST00000340611 EEF1A2Q05639 463 aaKnown RBP13.86□□□□□ -0.19
BRAT1-201ENST00000340611 HES5Q5TA89 166 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 MEDAGQ5VYS4 303 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 SLC27A4Q6P1M0 643 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 FAM111BQ6SJ93 734 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 CLDN22Q8N7P3 220 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 OR52I1Q8NGK6 324 aa13.86□□□□□ -0.19
BRAT1-201ENST00000340611 EDARADDQ8WWZ3 215 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms