RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ACSS1Q9NUB1 689 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RCC2Q9P258 522 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ASH2LQ9UBL3 628 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RCE1Q9Y256 329 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PPIL1Q9Y3C6 166 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 OR10H1Q9Y4A9 318 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 DSPP15924 2871 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CCDC163A0A0D9SF12 145 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 GSAPA4D1B5 854 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RFPL4AA6NLU0 287 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RFPL4AL1F8VTS6 287 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PRAMEF26H0Y7S4 382 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 EMC8O43402 210 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TBL1XO60907 577 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CLDN11O75508 207 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CLDN9O95484 217 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ETHE1O95571 254 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CPSF4O95639 269 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 IGSF6O95976 241 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CD8AP01732 235 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 AVPR2P30518 371 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 HSD17B7P56937 341 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RNF4P78317 190 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 DEFA6Q01524 100 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF345Q14585 488 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 INPP5JQ15735 1006 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 RPE65Q16518 533 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CPSF6Q16630 551 aaKnown RBP eCLIP5.14□□□□□ -1.593e-7■□□□□ 8.6
CSDE1-202ENST00000339438 CDNFQ49AH0 187 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MARC1Q5VT66 337 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CYB5R2Q6BCY4 276 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 FAAP20Q6NZ36 180 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 KCNRGQ8N5I3 272 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SIRT6Q8N6T7 355 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 TMIEQ8NEW7 156 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SORCS1Q8WY21 1168 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 APOLD1Q96LR9 279 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 PKP4Q99569 1192 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 IFT27Q9BW83 186 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 CHST5Q9GZS9 411 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 LAT2Q9GZY6 243 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 OPA3Q9H6K4 179 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 MRPL15Q9P015 296 aaKnown RBP5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF69Q9UC07 566 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 ZMIZ1Q9ULJ6 1067 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 GPR52Q9Y2T5 361 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 SPAG17Q6Q759 2223 aa5.14□□□□□ -1.59
CSDE1-202ENST00000339438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TRBC2A0A5B9 178 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR6C74A6NCV1 312 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C9JQL5 133 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 E9PI62 339 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RPL36A-HNRNPH2H7BZ11 118 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 DLL1O00548 723 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 FMO6PO60774 539 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RAMP2O60895 175 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RDH16O75452 317 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 STC2O76061 302 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PPP1R3DO95685 299 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SERPIND1P05546 499 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 S100A9P06702 114 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TACR2P21452 398 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ACKR3P25106 362 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MAS1LP35410 378 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SLC11A2P49281 568 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 BPIFB3P59826 476 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 LSM6P62312 80 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MPPED2Q15777 294 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF791Q3KP31 576 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ATP13A5Q4VNC0 1218 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 LRRC73Q5JTD7 316 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 HEPHL1Q6MZM0 1159 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C1orf94Q6P1W5 598 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 UBE2R2Q712K3 238 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PIP4P1Q86T03 277 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CCDC54Q8NEL0 328 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MALSU1Q96EH3 234 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CLCC1Q96S66 551 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 GAS2L1Q99501 681 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 VRK1Q99986 396 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MRPL37Q9BZE1 423 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RDH14Q9HBH5 336 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 NKIRAS2Q9NYR9 191 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 KLK11Q9UBX7 282 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF230Q9UIE0 474 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SLCO1B1Q9Y6L6 691 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 IDSB3KWA1 339 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C5orf58C9J3I9 102 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 LRRN3E7EW58 273 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PYCARD-AS1I3L0S3 204 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 FAAHO00519 579 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TXNL1O43396 289 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PIP5K1CO60331 668 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 COL9A1P20849 921 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 HSD3B2P26439 372 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ADH7P40394 386 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PTH2RP49190 550 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RBP2P50120 134 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RAB5BP61020 215 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms