RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
PCDH8-201ENST00000338862 UBL4AP11441 157 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 CDK2P24941 298 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 CAMK2DQ13557 499 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 GRM7Q14831 915 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 Q96M85 177 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 PTDSS2Q9BVG9 487 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 BCL2L10Q9HD36 194 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
PCDH8-201ENST00000338862 MLXQ9UH92 298 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 DOCK9Q9BZ29 2069 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 BRWD1Q9NSI6 2320 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 IGKV1-8A0A0C4DH67 115 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 M0QYG6 137 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 RDH16O75452 317 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF10P21506 573 aaPredicted RBP13.04□□□□□ -0.32
PCDH8-201ENST00000338862 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
PCDH8-201ENST00000338862 C19orf57Q0VDD7 668 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 GFOD2Q3B7J2 385 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM65Q6PI78 240 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM64Q6YI46 380 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 PRR22Q8IZ63 422 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 OR52R1Q8NGF1 315 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 COPZ2Q9P299 210 aa13.04□□□□□ -0.32
PCDH8-201ENST00000338862 PAPLNO95428 1278 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
PCDH8-201ENST00000338862 HTR2AP28223 471 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 AQP2P41181 271 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 LIMK1P53667 647 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF619Q8N2I2 560 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
PCDH8-201ENST00000338862 ACTR6Q9GZN1 396 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 TRPV4Q9HBA0 871 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 OR2S2Q9NQN1 319 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 SLC39A1Q9NY26 324 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 ACAD8Q9UKU7 415 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 EEF1E1-BLOC1S5C9J1V9 151 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 LILRB5O75023 590 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 CST6Q15828 149 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 FAM46BQ96A09 425 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
PCDH8-201ENST00000338862 SLC6A5Q9Y345 797 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 CDC14CA4D256 554 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 URADA6NGE7 173 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 MCIDASD6RGH6 385 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 ACHEP22303 614 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 GNALP38405 381 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 CTXN1P60606 82 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 FBXW5Q969U6 566 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 SCMH1Q96GD3 660 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 ARPC5LQ9BPX5 153 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
PCDH8-201ENST00000338862 hCG_1807616A0A1W2PRN6 198 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 TOR1AO14656 332 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 FGF17O60258 216 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 KAT7O95251 611 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 ECDO95905 644 aaPredicted RBP13.02□□□□□ -0.32
PCDH8-201ENST00000338862 OR10K2Q6IF99 312 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 DPY19L4Q7Z388 723 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 FAM219AQ8IW50 185 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 OR51S1Q8NGJ8 323 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 WDR34Q96EX3 536 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 TRIM2Q9C040 744 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 PRSS16Q9NQE7 514 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 CMC2Q9NRP2 79 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 RXFP3Q9NSD7 469 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 LYARQ9NX58 379 aaKnown RBP13.02□□□□□ -0.32
PCDH8-201ENST00000338862 ELF5Q9UKW6 265 aaPredicted RBP13.02□□□□□ -0.32
PCDH8-201ENST00000338862 CAMK2AQ9UQM7 478 aa13.02□□□□□ -0.32
PCDH8-201ENST00000338862 A0A1W2PPV9 198 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 PYCARD-AS1I3L0S3 204 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 SYT5O00445 386 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 ZIC2O95409 532 aaPredicted RBP13.02□□□□□ -0.33
PCDH8-201ENST00000338862 SNRPNP63162 240 aaKnown RBP13.02□□□□□ -0.33
PCDH8-201ENST00000338862 MAT1AQ00266 395 aaKnown RBP13.02□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF85Q03923 595 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 ARHGAP19Q14CB8 494 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 STK11Q15831 433 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 PRAMEF17Q5VTA0 474 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 TRILQ7L0X0 811 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.33
PCDH8-201ENST00000338862 TMEM106AQ96A25 262 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 C3orf49Q96BT1 292 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 NRIP3Q9NQ35 241 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 HRASLS2Q9NWW9 162 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 MAOBP27338 520 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 MAP3K8P41279 467 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 GAS1P54826 345 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 ADAM8P78325 824 aa13.02□□□□□ -0.33
PCDH8-201ENST00000338862 RAB12Q6IQ22 244 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms