RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 BPIFA2Q96DR5 249 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SCMH1Q96GD3 660 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 FCRL4Q96PJ5 515 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 OR2M2Q96R28 347 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 DCLRE1CQ96SD1 692 aaKnown RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 GPX7Q96SL4 187 aaPredicted RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 TEAD3Q99594 435 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 WACQ9BTA9 647 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 LRRC61Q9BV99 259 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 PRR14Q9BWN1 585 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 HDHD5Q9BXW7 423 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SLC19A3Q9BZV2 496 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 PRORYQ9H606 182 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 PAQR5Q9NXK6 330 aaPredicted RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 TBC1D29Q9UFV1 150 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 PLEKHM1Q9Y4G2 1056 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 NUBP2Q9Y5Y2 271 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 A0A0J9YY10 115 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CPED1A4D0V7 1026 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CD8B2A6NJW9 211 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 EFCAB7A8K855 629 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 NOTOA8MTQ0 251 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 C2orf74A8MZ97 194 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 LMO7DNF2Z398 122 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 NPIPB9F8W1W9 429 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ARPC3O15145 178 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 P2RX6O15547 441 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 GALR3O60755 368 aaPredicted RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 PPM1BO75688 479 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 APOL3O95236 402 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CH25HO95992 272 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 DHFRP00374 187 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 OR2T7P0C7T2 308 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 SLC35E2P0CK97 266 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CD8BP10966 210 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 PSKH1P11801 424 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 APEHP13798 732 aaKnown RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 ZNF24P17028 368 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 AHCYP23526 432 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 GALNSP34059 522 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 RCVRNP35243 200 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 LSSP48449 732 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 SCAND1P57086 179 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 GABREP78334 506 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ZNF85Q03923 595 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 TLE3Q04726 772 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 LGALS3BPQ08380 585 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 C1orf61Q13536 156 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 NR0B2Q15466 257 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 MAPK14Q16539 360 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CDONQ4KMG0 1287 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 PRRT3Q5FWE3 981 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 UNQ9370/PRO34162Q6UXP9 181 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 SLC35F3Q8IY50 421 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ZNF440Q8IYI8 595 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 TMEM99Q8N816 258 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 YIPF7Q8N8F6 280 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 OR2T27Q8NH04 317 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ANGPTL6Q8NI99 470 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 LIPHQ8WWY8 451 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 OR1E3Q8WZA6 343 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 RERGQ96A58 199 aaPredicted RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 SMIM19Q96E16 107 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 RBM18Q96H35 190 aaKnown RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 DPH1Q9BZG8 443 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ACTR6Q9GZN1 396 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 PLEKHA1Q9HB21 404 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ENAMQ9NRM1 1142 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 AKAP7Q9P0M2 348 aaPredicted RBP9.89□□□□□ -0.83
RTN3-201ENST00000338850 CHRNA9Q9UGM1 479 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 ST6GALNAC2Q9UJ37 374 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 CACNG2Q9Y698 323 aa9.89□□□□□ -0.83
RTN3-201ENST00000338850 KIR2DS5A0A0G2JLQ3 304 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 A0A0G2JNG1 304 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 A0A1B0GVI7 797 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 GXYLT2A0PJZ3 443 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 KIR2DS3K7RE56 304 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 CTSVO60911 334 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 NDUFB2O95178 105 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 SLC2A10O95528 541 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 CELA2BP08218 269 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 UCHL1P09936 223 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 NT5EP21589 574 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 GPR143P51810 404 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 UBE2IP63279 158 aaKnown RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 MRPS10P82664 201 aaKnown RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 PLAURQ03405 335 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 ILF3Q12906 894 aaKnown RBP eCLIP9.88□□□□□ -0.83
RTN3-201ENST00000338850 FOXD4Q12950 439 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms