RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 H0YIV9 168 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PET100P0DJ07 73 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 KIAA0040Q15053 153 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 AMZ1Q400G9 498 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 CLLU1OSQ5K130 101 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 OR10K2Q6IF99 312 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 COMTD1Q86VU5 262 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 IL17RCQ8NAC3 791 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 RNF170Q96K19 258 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 FAM83CQ9BQN1 747 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 SLC52A3Q9NQ40 469 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 EPHA6Q9UF33 1036 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 C14orf166Q9Y224 244 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF20P17024 532 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 CBFBQ13951 182 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ETFDHQ16134 617 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 GXYLT1Q4G148 440 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 STEAP1BQ6NZ63 245 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 DPPA2Q7Z7J5 298 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF679Q8IYX0 411 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF689Q96CS4 500 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 IGSF21Q96ID5 467 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SAMD11Q96NU1 681 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SORCS2Q96PQ0 1159 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 NTMQ9P121 344 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ARFGEF1Q9Y6D6 1849 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 PYCARD-AS1I3L0S3 204 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 HTR3BO95264 441 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SLC34A2O95436 690 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 AGR2O95994 175 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF30P17039 623 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 CXCR1P25024 350 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 OR4C11Q6IEV9 310 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 BVESQ8NE79 360 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF514Q96K75 400 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ELF4Q99607 663 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 LDAHQ9H6V9 325 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 CYP8B1Q9UNU6 501 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 PTPRFP10586 1907 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 C1QTNF3-AMACRE9PGA6 284 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SLC33A1O00400 549 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SLC31A1O15431 190 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 PLGP00747 810 aaPredicted RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 S100A8P05109 93 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 RPL34P49207 117 aaKnown RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 NR0B1P51843 470 aaKnown RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 VAMP2P63027 116 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 ITPRIPL2Q3MIP1 535 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 KLHDC8AQ8IYD2 350 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 OR13C9Q8NGT0 318 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 UBTD2Q8WUN7 234 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 METTL21AQ8WXB1 218 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 CDS1Q92903 461 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 FBXO17Q96EF6 278 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 SIDT1Q9NXL6 827 aaKnown RBP12.3□□□□□ -0.44
COL2A1-201ENST00000337299 MIOXQ9UGB7 285 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 PCDHB10Q9UN67 800 aa12.3□□□□□ -0.44
COL2A1-201ENST00000337299 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 GABARAPH6UMI1 98 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 IGF2P01344 180 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 HCKP08631 526 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 FUT1P19526 365 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 CDK2P24941 298 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 ALDH3B1P43353 468 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 MECP2P51608 486 aaKnown RBP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 RPL13AP3Q6NVV1 102 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 KIAA1324Q6UXG2 1013 aaKnown RBP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 HSD11B1LQ7Z5J1 315 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 GLRX5Q86SX6 157 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 OR2A12Q8NGT7 310 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 APMAPQ9HDC9 416 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 SLC35A3Q9Y2D2 325 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 WNT6Q9Y6F9 365 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 A0A0B4J293 547 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 FGF18O76093 207 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 ITGA5P08648 1049 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 GAAP10253 952 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 SPI1P17947 270 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 FABP9Q0Z7S8 132 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms