RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ASB12Q8WXK4 309 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 TXNDC15Q96J42 360 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 MRGPRX1Q96LB2 322 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 SPACA5Q96QH8 159 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 FKRPQ9H9S5 495 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 MGAT4CQ9UBM8 478 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 RPH3AQ9Y2J0 694 aaPredicted RBP7.59□□□□□ -1.19
HPS4-201ENST00000336873 AP1M2Q9Y6Q5 423 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 C13orf42A0A1B0GVH6 325 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 G3V3Y1 287 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 H2AFB2P0C5Z0 115 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 DNASE1L1P49184 302 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 VEGFCP49767 419 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 SNRPGP62308 76 aaKnown RBP7.59□□□□□ -1.19
HPS4-201ENST00000336873 GPR176Q14439 515 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 QSOX2Q6ZRP7 698 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 LINC00299Q6ZSB3 139 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 CD163Q86VB7 1156 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 GID4Q8IVV7 300 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 PLPP6Q8IY26 295 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 CRIPAKQ8N1N5 446 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 OR6F1Q8NGZ6 308 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 HCAR2Q8TDS4 363 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 ATG5Q9H1Y0 275 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 MIXL1Q9H2W2 232 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 KCNK15Q9H427 330 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 EPHX3Q9H6B9 360 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 RBFOX1Q9NWB1 397 aaKnown RBP7.59□□□□□ -1.19
HPS4-201ENST00000336873 CD207Q9UJ71 328 aa7.59□□□□□ -1.19
HPS4-201ENST00000336873 SURF4O15260 269 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 NDUFB2O95178 105 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 F10P00742 488 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 RNH1P13489 461 aaKnown RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 GTF2F2P13984 249 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 GUCA1AP43080 201 aaPredicted RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 PSMA6P60900 246 aaKnown RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 ALG10Q5BKT4 473 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 APOOLQ6UXV4 268 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 TEX19Q8NA77 164 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 RCBTB1Q8NDN9 531 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 HSD17B8Q92506 261 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 SERINC2Q96SA4 455 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 CNN2Q99439 309 aaKnown RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 MAN2C1Q9NTJ4 1040 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 ZSCAN32Q9NX65 697 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 PLEKHB1Q9UF11 243 aaPredicted RBP7.59□□□□□ -1.2
HPS4-201ENST00000336873 CACNG2Q9Y698 323 aa7.59□□□□□ -1.2
HPS4-201ENST00000336873 TCF20Q9UGU0 1960 aaKnown RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 SHISA3A0PJX4 238 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SBK2P0C263 348 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SLC2A1P11166 492 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 NPR2P20594 1047 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SFTPDP35247 375 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 RFX2P48378 723 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SPOCK1Q08629 439 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ALG11Q2TAA5 492 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 TMEM52BQ4KMG9 183 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 C3orf38Q5JPI3 329 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 CBLN3Q6UW01 205 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 MED25Q71SY5 747 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SSX6Q7RTT6 188 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 KIAA0907Q7Z7F0 614 aaPredicted RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 LINC00346Q8IVM7 164 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SLC35F2Q8IXU6 374 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ZNF101Q8IZC7 436 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ARMC10Q8N2F6 343 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 OR5M1Q8NGP8 315 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 GOT1L1Q8NHS2 421 aaPredicted RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 GIMAP1Q8WWP7 306 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 S100A16Q96FQ6 103 aaKnown RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 AIFM2Q9BRQ8 373 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ARHGAP9Q9BRR9 750 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 EMC6Q9BV81 110 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 COMMD4Q9H0A8 199 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 EXO5Q9H790 373 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 RXFP3Q9NSD7 469 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 HMX3A6NHT5 357 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 GPR89AB7ZAQ6 455 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SLC16A7O60669 478 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SPDEFO95238 335 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 GPR89BP0CG08 455 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SLC6A9P48067 706 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 EEF1A2Q05639 463 aaKnown RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 FUT5Q11128 374 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 MEP1BQ16820 701 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 FAM69BQ5VUD6 431 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ALKAL2Q6UX46 152 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 BATF2Q8N1L9 274 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ESX1Q8N693 406 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 POGLUT1Q8NBL1 392 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 MFSD9Q8NBP5 474 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 OR51D1Q8NGF3 324 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 SYNPRQ8TBG9 265 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 ATOH1Q92858 354 aaPredicted RBP7.58□□□□□ -1.2
HPS4-201ENST00000336873 TSLPQ969D9 159 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 PPP1R14AQ96A00 147 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 TMEM106AQ96A25 262 aa7.58□□□□□ -1.2
HPS4-201ENST00000336873 UPRTQ96BW1 309 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms