RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 OR2T27Q8NH04 317 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SIAEQ9HAT2 523 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ELOVL3Q9HB03 270 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 C5AR2Q9P296 337 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 STEAP1Q9UHE8 339 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 OR5K3A6NET4 321 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 HLA-HP01893 362 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 RAB38P57729 211 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 KCNJ10P78508 379 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SELPLGQ14242 412 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PCK2Q16822 640 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SLC22A6Q4U2R8 563 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 HBMQ6B0K9 141 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MOB3CQ70IA8 216 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PTRH2Q9Y3E5 179 aaKnown RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 NPFFR2Q9Y5X5 522 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 TRAF3IP2O43734 574 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 C1orf105O95561 183 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MT-ND4P03905 459 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 DBHP09172 617 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 NFYBP25208 207 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 GDF1P27539 372 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 SORDQ00796 357 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ESCO2Q56NI9 601 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ZNF684Q5T5D7 378 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ZFP90Q8TF47 636 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 EXO1Q9UQ84 846 aaKnown RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 VDAC3Q9Y277 283 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 GABRPO00591 440 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 TOX4O94842 621 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 EDN1P05305 212 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 GIPRP48546 466 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MTNR1BP49286 362 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 FAM122BQ7Z309 247 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PARP16Q8N5Y8 322 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 PXT1Q8NFP0 134 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MDGA1Q8NFP4 955 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 UBTD2Q8WUN7 234 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 SLC41A2Q96JW4 573 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
HLCS-201ENST00000336648 PDCD1LG2Q9BQ51 273 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 C1GALT1Q9NS00 363 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
HLCS-201ENST00000336648 CACNG3O60359 315 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 BCKDHBP21953 392 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 PSMB10P40306 273 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 YPEL5P62699 121 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 EID2Q8N6I1 236 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 DOK4Q8TEW6 326 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 BADQ92934 168 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 ANKRD9Q96BM1 317 aaPredicted RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 PRICKLE3O43900 615 aaPredicted RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 FBXO24O75426 580 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 CR2P20023 1033 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 TAF9Q16594 264 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 HSD11B1LQ7Z5J1 315 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 BPHLQ86WA6 291 aaPredicted RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 OR8J2Q8NGG1 315 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 TMIGD2Q96BF3 282 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 VN1R3Q9BXE9 311 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 CD207Q9UJ71 328 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 OSGIN2Q9Y236 505 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 MBLAC1A4D2B0 266 aaPredicted RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 LRIT2A6NDA9 550 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 CER1O95813 267 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 CD46P15529 392 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.466e-20■■■■■ 38.1
HLCS-201ENST00000336648 FOXA1P55317 472 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 PLK5Q496M5 336 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 FJX1Q86VR8 437 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 ATOH8Q96SQ7 321 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 TIMP1P01033 207 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 GABRB3P28472 473 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 LAP3P28838 519 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 ZNF91Q05481 1191 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 C1orf87Q8N0U7 546 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 OR10K1Q8NGX5 313 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLCS-201ENST00000336648 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 KATNB1Q9BVA0 655 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 NRIP3Q9NQ35 241 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 SYT5O00445 386 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 CBR1P16152 277 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 TAGLN2P37802 199 aaKnown RBP12.19□□□□□ -0.46
HLCS-201ENST00000336648 SLC6A18Q96N87 628 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 RNF186Q9NXI6 227 aa12.19□□□□□ -0.46
HLCS-201ENST00000336648 NXT1Q9UKK6 140 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms