RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GPR89AB7ZAQ6 455 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PDCD5O14737 125 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 GATBO75879 557 aaKnown RBP15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ECDO95905 644 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ADH1BP00325 375 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 GPR89BP0CG08 455 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ANXA3P12429 323 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 DUSP8Q13202 625 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ALG10BQ5I7T1 473 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PAQR7Q86WK9 346 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ZNF761Q86XN6 746 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 LNX2Q8N448 690 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PDCD1LG2Q9BQ51 273 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PRSS27Q9BQR3 290 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ZNF649Q9BS31 505 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 CMC2Q9NRP2 79 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 TMEM74BQ9NUR3 256 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 DAPP1Q9UN19 280 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 HEBP2Q9Y5Z4 205 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 LINC01553A4QN01 128 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 LRRN3E7EW58 273 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 P2RX6O15547 441 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 EGFP01133 1207 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 HLA-DQB1P01920 261 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 SELLP14151 372 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 NID1P14543 1247 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PTBP1P26599 531 aaKnown RBP eCLIP15.23■□□□□ 0.039e-7■■■■■ 27.6
CDC42EP4-201ENST00000335793 RBMS1P29558 406 aaKnown RBP15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 FLI1Q01543 452 aaPredicted RBP15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 CYB5R2Q6BCY4 276 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 FBXO42Q6P3S6 717 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 FIGLAQ6QHK4 219 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ZNF559Q9BR84 538 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 ORAI3Q9BRQ5 295 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 CFHR5Q9BXR6 569 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 LRRN3Q9H3W5 708 aa15.23■□□□□ 0.03
CDC42EP4-201ENST00000335793 PRSS38A1L453 326 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SEC16AO15027 2179 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 FGF17O60258 216 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 CTSVO60911 334 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SOX30O94993 753 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 RPP14O95059 124 aaKnown RBP15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 NPR2P20594 1047 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 HES5Q5TA89 166 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 BRIX1Q8TDN6 353 aaKnown RBP15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SLC22A18Q96BI1 424 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 BHLHE40O14503 412 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 CCR4P51679 360 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 TAS2R43P59537 309 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 TFAP2EQ6VUC0 442 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 ABHD13Q7L211 337 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 UXS1Q8NBZ7 420 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 RELTQ969Z4 430 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SORCS2Q96PQ0 1159 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 OR14A2Q96R54 314 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SERINC2Q96SA4 455 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 SLC25A18Q9H1K4 315 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 LDAHQ9H6V9 325 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 IER3IP1Q9Y5U9 82 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
CDC42EP4-201ENST00000335793 LPLP06858 475 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 H2AFB2P0C5Z0 115 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 TFPIP10646 304 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 KCNJ3P48549 501 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 HOXA1P49639 335 aaPredicted RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 CLDN12P56749 244 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 FXYD6P3P58550 94 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 ACSM1Q08AH1 577 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 ZNF425Q6IV72 752 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 RNF44Q7L0R7 432 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 SSX6Q7RTT6 188 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 CDRT4Q8N9R6 151 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 CAMKVQ8NCB2 501 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 ADAMTS14Q8WXS8 1223 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 PEX11GQ96HA9 241 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 CRB3Q9BUF7 120 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 LMAN2LQ9H0V9 348 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 SLC39A1Q9NY26 324 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 SIGLEC7Q9Y286 467 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 MRPS2Q9Y399 296 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 NDUFS1P28331 727 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 TSFMP43897 325 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 EEF1A1P68104 462 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 PARGQ86W56 976 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 RFLNBQ8N5W9 214 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 OR2T35Q8NGX2 323 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 PATE1Q8WXA2 126 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 DNAJA3Q96EY1 480 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 C10orf90Q96M02 699 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 CMSS1Q9BQ75 279 aaKnown RBP15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 AUP1Q9Y679 476 aa15.21■□□□□ 0.03
CDC42EP4-201ENST00000335793 KLF4O43474 513 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 ARL6IP5O75915 188 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 EN2P19622 333 aaPredicted RBP15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 SLC6A6P31641 620 aa15.21■□□□□ 0.02
CDC42EP4-201ENST00000335793 HSF2Q03933 536 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms