RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 DAZAP2Q15038 168 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 LRRC23Q53EV4 343 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 CYBRD1Q53TN4 286 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 ENTPD8Q5MY95 495 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 OTUD3Q5T2D3 398 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF100Q8IYN0 542 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 TMEM99Q8N816 258 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 CCDC197Q8NCU1 140 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 VANGL1Q8TAA9 524 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 SLC25A36Q96CQ1 311 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF300Q96RE9 604 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 EPYCQ99645 322 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 KCTD14Q9BQ13 255 aaPredicted RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 SPAG4Q9NPE6 437 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 PARPBPQ9NWS1 579 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 ADPRHL2Q9NX46 363 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
LIMS1-201ENST00000332345 NOSIPQ9Y314 301 aaKnown RBP12.45□□□□□ -0.42
LIMS1-201ENST00000332345 DCHS2Q6V1P9 2916 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TRAV36DV7A0A075B6V5 113 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TRAPPC13A5PLN9 417 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 AQP7P3A6NL99 342 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 CPSF4LA6NMK7 179 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF716A6NP11 495 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 CXCR6O00574 342 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 MRPL33O75394 65 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 GMNNO75496 209 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 PPP3CBP16298 524 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 RPS5P46782 204 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 OR3A2P47893 321 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 GSK3BP49841 420 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 EGR4Q05215 589 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 KRT72Q14CN4 511 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 MFSD13AQ14CX5 517 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 P2RY6Q15077 328 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 NPTX1Q15818 432 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 FAM69AQ5T7M9 428 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 CARM1Q86X55 608 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 ADAMTS16Q8TE57 1224 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 KTI12Q96EK9 354 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 SF3B5Q9BWJ5 86 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 POLR2J2Q9GZM3 115 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 PCDHAC1Q9H158 963 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 POLR2J3Q9H1A7 115 aaKnown RBP12.44□□□□□ -0.42
LIMS1-201ENST00000332345 ARL8BQ9NVJ2 186 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 NDE1Q9NXR1 346 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 ABCD2Q9UBJ2 740 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 GPR52Q9Y2T5 361 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 NAV2Q8IVL1 2488 aa12.44□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF814B7Z6K7 855 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 CHP2O43745 196 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 GOSR1O95249 250 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 IFNA8P32881 189 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 MXRA7P84157 204 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 C16orf89Q6UX73 402 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 STAC2Q6ZMT1 411 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 Q6ZT83 130 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 GPAT4Q86UL3 456 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 FITM2Q8N6M3 262 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 STEAP2Q8NFT2 490 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 OR4D11Q8NGI4 311 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 OR6S1Q8NH40 331 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 MPP4Q96JB8 637 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 WFIKKN1Q96NZ8 548 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 USB1Q9BQ65 265 aaKnown RBP12.43□□□□□ -0.42
LIMS1-201ENST00000332345 MED18Q9BUE0 208 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 PTDSS2Q9BVG9 487 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 ZNF226Q9NYT6 803 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
LIMS1-201ENST00000332345 RASD1Q9Y272 281 aa12.43□□□□□ -0.42
LIMS1-201ENST00000332345 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 A6NNC1 897 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 FTCDNL1E5RQL4 147 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 RAMP1O60894 148 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 CTAG2O75638 210 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 ADAP00813 363 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 PSMB1P20618 241 aaKnown RBP12.42□□□□□ -0.42
LIMS1-201ENST00000332345 TAS2R41P59536 307 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 ITGADQ13349 1161 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 TTC33Q6PID6 262 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-201ENST00000332345 LINC00114Q6XXX2 140 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 H1FNTQ75WM6 255 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-201ENST00000332345 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-201ENST00000332345 P3H2Q8IVL5 708 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 PGAM4Q8N0Y7 254 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 GABRG1Q8N1C3 465 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
LIMS1-201ENST00000332345 APH1AQ96BI3 265 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms