RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 HNRNPCL3B7ZW38 293 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 GPR171O14626 319 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 EIF1BO60739 113 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 HNRNPCL1O60812 293 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 CPSF4O95639 269 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 YES1P07947 543 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 HNRNPCL4P0DMR1 293 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 PAX1P15863 534 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 HOXB9P17482 250 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 LOXP28300 417 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 SLC7A1P30825 629 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 CPOXP36551 454 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 POLR2JP52435 117 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 AGFG1P52594 562 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 ART1P52961 327 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 SLC16A1P53985 500 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 IST1P53990 364 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 CRISP3P54108 245 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 RIPPLY3P57055 190 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 STX1BP61266 288 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 FAM27E3Q08E93 113 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TOMM34Q15785 309 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 MAPK14Q16539 360 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 DEFB113Q30KQ7 82 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TMEM176BQ3YBM2 270 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 TIGD2Q4W5G0 525 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 SLC9B1Q4ZJI4 515 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 LIN52Q52LA3 116 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 GPAT3Q53EU6 434 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 SYT14P1Q58G82 188 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 BEX5Q5H9J7 111 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 LRIF1Q5T3J3 769 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TNFAIP8L2Q6P589 184 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 TFAP2EQ6VUC0 442 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 STAC2Q6ZMT1 411 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TMPPEQ6ZT21 453 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 Q6ZT83 130 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 MAVSQ7Z434 540 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 MTDHQ86UE4 582 aaKnown RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 P2RY8Q86VZ1 359 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 RNF130Q86XS8 419 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 PEX5LQ8IYB4 626 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TMCO5AQ8N6Q1 288 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 ZNF614Q8N883 585 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 OR5M1Q8NGP8 315 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 LINC01560Q8TB33 94 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 PIGXQ8TBF5 258 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 LRRC8CQ8TDW0 803 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 WDR60Q8WVS4 1066 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 PIGTQ969N2 578 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 ZHX1-C8orf76Q96EF9 292 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 BOD1Q96IK1 185 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 WFIKKN1Q96NZ8 548 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 JMJD8Q96S16 334 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 NPAS1Q99742 590 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 MED18Q9BUE0 208 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 OPN3Q9H1Y3 402 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 RABEP2Q9H5N1 569 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 WDR55Q9H6Y2 383 aaPredicted RBP5.63□□□□□ -1.51
SMG1-201ENST00000330588 BCL2L10Q9HD36 194 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 A4GALTQ9NPC4 353 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 NGBQ9NPG2 151 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 TCF7L2Q9NQB0 619 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 EMC3Q9P0I2 261 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 CHRNA9Q9UGM1 479 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 IFT52Q9Y366 437 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 NAV2Q8IVL1 2488 aa5.63□□□□□ -1.51
SMG1-201ENST00000330588 RAI1Q7Z5J4 1906 aaPredicted RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 UQCRHLA0A096LP55 91 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 NPIPA5A0A0B4J1W7 369 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 GOLGA8QA0A0J9YX86 632 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 GOLGA8OA6NCC3 632 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 NPIPA7E9PJI5 369 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 GOLGA8NF8WBI6 632 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 POLR3GO15318 223 aaPredicted RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 GCM2O75603 506 aaPredicted RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 CHRM4P08173 479 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 UBTFL6P0CB48 400 aaPredicted RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 NPIPA8P0DM63 369 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 NR2F1P10589 423 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 ETS2P15036 469 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 H2AFXP16104 143 aaPredicted RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 BTF3P20290 206 aaKnown RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 TCEA1P23193 301 aaKnown RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 SHC1P29353 583 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 SFTPDP35247 375 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 SLC1A3P43003 542 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 OR3A2P47893 321 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 RPS6KA3P51812 740 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 POLR2HP52434 150 aaKnown RBP5.62□□□□□ -1.51
SMG1-201ENST00000330588 SIRPAP78324 504 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 H3F3AP84243 136 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 MERTKQ12866 999 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 EPS8Q12929 822 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 SHEQ5VZ18 495 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 NXNQ6DKJ4 435 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 ADAM5Q6NVV9 412 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 C5orf46Q6UWT4 87 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 PRSS57Q6UWY2 283 aa5.62□□□□□ -1.51
SMG1-201ENST00000330588 ZNF621Q6ZSS3 439 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms