RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C7orf57Q8NEG2 295 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 SMIM4Q8WVI0 70 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 ZNRF4Q8WWF5 429 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 ACTR6Q9GZN1 396 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 HRASLS2Q9NWW9 162 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 NCDNQ9UBB6 729 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 ELF5Q9UKW6 265 aaPredicted RBP14.09□□□□□ -0.15
BRCC3-201ENST00000330045 SCML1Q9UN30 329 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 U3KQ87 197 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 FANCMQ8IYD8 2048 aa14.09□□□□□ -0.15
BRCC3-201ENST00000330045 A0A0J9YY10 115 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 A0A1W2PQ72 361 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 ZNF879B4DU55 563 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 SRMP19623 302 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 HNRNPA2B1P22626 353 aaKnown RBP14.08□□□□□ -0.15
BRCC3-201ENST00000330045 UQCRC1P31930 480 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 GDNFP39905 211 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 PSMB10P40306 273 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 ARPC4P59998 168 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 FAM53BQ14153 422 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 ALG11Q2TAA5 492 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 ESCO2Q56NI9 601 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 TMEM92Q6UXU6 159 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 CMTM4Q8IZR5 234 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 BEST4Q8NFU0 473 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 OR56B4Q8NH76 319 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 CMTM3Q96MX0 182 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 DERL3Q96Q80 235 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 NMNAT3Q96T66 252 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 CCDC3Q9BQI4 270 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 AUNIPQ9H7T9 357 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 NOX4Q9NPH5 578 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 COPS3Q9UNS2 423 aa14.08□□□□□ -0.15
BRCC3-201ENST00000330045 ARHGEF17Q96PE2 2063 aaPredicted RBP14.08□□□□□ -0.16
BRCC3-201ENST00000330045 GPR171O14626 319 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 SELENOFO60613 162 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 GPR143P51810 404 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 FGFBP1Q14512 234 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 NPEPL1Q8NDH3 523 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 MRPL48Q96GC5 212 aaKnown RBP14.08□□□□□ -0.16
BRCC3-201ENST00000330045 MS4A3Q96HJ5 214 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 CPNE7Q9UBL6 633 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 CD207Q9UJ71 328 aa14.08□□□□□ -0.16
BRCC3-201ENST00000330045 A0A1B0GVI7 797 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 LEUTXA8MZ59 168 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF593O00488 134 aaPredicted RBP14.07□□□□□ -0.16
BRCC3-201ENST00000330045 GPRIN2O60269 458 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 TPOP07202 933 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 GUSBP08236 651 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ADRB1P08588 477 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SULT1A3P0DMM9 295 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SULT1A4P0DMN0 295 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 POU3F3P20264 500 aaPredicted RBP14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SDHBP21912 280 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ILF3Q12906 894 aaKnown RBP eCLIP14.07□□□□□ -0.164e-6■■■■□ 22.7
BRCC3-201ENST00000330045 ZNF141Q15928 474 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 DPY19L2P2Q6ZN68 376 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 FGD2Q7Z6J4 655 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ELMOD2Q8IZ81 293 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF680Q8NEM1 530 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 PHYHIPQ92561 330 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 HGDQ93099 445 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 MED30Q96HR3 178 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 HSPA12BQ96MM6 686 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 GON4LQ3T8J9 2241 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 MEIKINA0A087WXM9 373 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ANKRD61A6NGH8 418 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SSNA1O43805 119 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SLC22A5O76082 557 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 RAF1P04049 648 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 SPI1P17947 270 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 FAM209AQ5JX71 171 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 LINGO2Q7L985 606 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF527Q8NB42 609 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 OR6K6Q8NGW6 343 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ORAI1Q96D31 301 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF275Q9NSD4 429 aaPredicted RBP14.07□□□□□ -0.16
BRCC3-201ENST00000330045 RABL2AQ9UBK7 228 aaPredicted RBP14.07□□□□□ -0.16
BRCC3-201ENST00000330045 RABL2BQ9UNT1 228 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 RNF215Q9Y6U7 377 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
BRCC3-201ENST00000330045 A0A087WUJ7 227 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 OR6C68A6NDL8 312 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 IMPA2O14732 288 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 PIN1P1O15428 100 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 HCRTR1O43613 425 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 CRYZL1O95825 349 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 CAMK2DQ13557 499 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 COL19A1Q14993 1142 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 SLC35D3Q5M8T2 416 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 HES5Q5TA89 166 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 RCBTB1Q8NDN9 531 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 RIT1Q92963 219 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 C20orf85Q9H1P6 137 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 BEX1Q9HBH7 125 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 POT1Q9NUX5 634 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 C2orf42Q9NWW7 574 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms