RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DEFB110Q30KQ9 67 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 RAB12Q6IQ22 244 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 MFSD12Q6NUT3 480 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 RHOUQ7L0Q8 258 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 TSEN15Q8WW01 171 aaKnown RBP13.09□□□□□ -0.31
PABPC1-201ENST00000318607 TMEM74BQ9NUR3 256 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SLC6A5Q9Y345 797 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 NOP16Q9Y3C1 178 aaKnown RBP13.09□□□□□ -0.31
PABPC1-201ENST00000318607 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 H7C2Y5 167 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 HOXA2O43364 376 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-201ENST00000318607 HLA-DQB1P01920 261 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SRMP19623 302 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 FPR3P25089 353 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SEC61A1P61619 476 aaKnown RBP13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SIRPAP78324 504 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 ZNF85Q03923 595 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 CBFBQ13951 182 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 ERV3-1Q14264 604 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 ZNF273Q14593 569 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 DEFB118Q96PH6 123 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
PABPC1-201ENST00000318607 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 MCRIP1C9JLW8 97 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.31
PABPC1-201ENST00000318607 SUSD5O60279 629 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 NAGAP17050 411 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 FAM26DQ5JW98 314 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 METTL11BQ5VVY1 283 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 PSRC1Q6PGN9 363 aaPredicted RBP13.08□□□□□ -0.31
PABPC1-201ENST00000318607 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 GID4Q8IVV7 300 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 OR4N2Q8NGD1 307 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 TTC9Q92623 222 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 FAM46BQ96A09 425 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.31
PABPC1-201ENST00000318607 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 TREM1Q9NP99 234 aa13.08□□□□□ -0.31
PABPC1-201ENST00000318607 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.31
PABPC1-201ENST00000318607 OR5K3A6NET4 321 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 CTSAP10619 480 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.324e-38■■□□□ 12.2
PABPC1-201ENST00000318607 H2BFSP57053 126 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 SKP1P63208 163 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 FZD5Q13467 585 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 OLFML2AQ68BL7 652 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 HAGHLQ6PII5 290 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 ZNF546Q86UE3 836 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 OVCA2Q8WZ82 227 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 C12orf10Q9HB07 376 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 F5H0A9 414 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 KHNYNO15037 678 aaKnown RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 RBBP9O75884 186 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 C4BPBP20851 252 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 HTR2AP28223 471 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 SEC13P55735 322 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 ETFDHQ16134 617 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 ALG10BQ5I7T1 473 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 C12orf57Q99622 126 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 AICDAQ9GZX7 198 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
PABPC1-201ENST00000318607 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-201ENST00000318607 UNC13CQ8NB66 2214 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 SEC14L5O43304 696 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 CTNSO60931 367 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 GMFBP60983 142 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 GK2Q14410 553 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-201ENST00000318607 ZNF234Q14588 700 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
PABPC1-201ENST00000318607 LRRTM1Q86UE6 522 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 GLB1L2Q8IW92 636 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-201ENST00000318607 RAB42Q8N4Z0 105 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 OR56A1Q8NGH5 318 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 OR51A4Q8NGJ6 313 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 PAQR8Q8TEZ7 354 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 Q96M85 177 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 SLC38A3Q99624 504 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 ICKQ9UPZ9 632 aa13.07□□□□□ -0.32
PABPC1-201ENST00000318607 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms