RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 IFT22Q9H7X7 185 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 KRCC1Q9NPI7 259 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-202ENST00000318266 FANCFQ9NPI8 374 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 FBXO34Q9NWN3 711 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 CYB5R1Q9UHQ9 305 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 ANKRD20A5PA0PJZ0 165 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 PEX12O00623 359 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 PRAMEF2O60811 474 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 NDUFB6O95139 128 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 HPP00738 406 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-202ENST00000318266 SERPINA3P01011 423 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 MPIP34949 423 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 GPR85P60893 370 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 REEP5Q00765 189 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 CSRP2Q16527 193 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 TMED4Q7Z7H5 227 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 LINC01555Q8NAE3 123 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 FAM83CQ9BQN1 747 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 PBX4Q9BYU1 374 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 MED9Q9NWA0 146 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 HCFC1R1Q9NWW0 138 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF346Q9UL40 294 aaKnown RBP8.89□□□□□ -0.99
PTPRA-202ENST00000318266 SLC35A3Q9Y2D2 325 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 SLC6A5Q9Y345 797 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 COL4A3Q01955 1670 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 OR6C65A6NJZ3 312 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 DISC1C4P0D8 188 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 CDC123O75794 336 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 LIPCP11150 499 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ITPKBP27987 946 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 LUMP51884 338 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF136P52737 540 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 GMFBP60983 142 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR1Q1Q15612 314 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 B3GNTL1Q67FW5 361 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MRM1Q6IN84 353 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TSSK4Q6SA08 328 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 RNF180Q86T96 592 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 AMZ2Q86W34 360 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 CDK20Q8IZL9 346 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR2AK2Q8NG84 335 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 UQCC2Q9BRT2 126 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 STARD7Q9NQZ5 370 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR5V1Q9UGF6 321 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 FOXJ3Q9UPW0 622 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ARID1AO14497 2285 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 IGKV1-8A0A0C4DH67 115 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TMEM272A0A1B0GTI8 110 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TRAPPC13A5PLN9 417 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 CTDSPLO15194 276 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 RCBTB2O95199 551 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 LAMP2P13473 410 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 C6P13671 934 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 PRKAR1BP31321 381 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 BCL6P41182 706 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TAS2R20P59543 309 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 EIF2B5Q13144 721 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 IGSF11Q5DX21 431 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MRPL2Q5T653 305 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 HAGHLQ6PII5 290 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 BAIAP2L2Q6UXY1 529 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.88□□□□□ -0.997e-7■■■■□ 22.4
PTPRA-202ENST00000318266 NDUFAF7Q7L592 441 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TMPRSS12Q86WS5 348 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR7G2Q8NG99 324 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR51S1Q8NGJ8 323 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR4C16Q8NGL9 310 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 OR2L2Q8NH16 312 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ZNRF4Q8WWF5 429 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 WDR13Q9H1Z4 485 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 KCNK15Q9H427 330 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ESRP2Q9H6T0 727 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ADAP2Q9NPF8 381 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 SIGLEC7Q9Y286 467 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ADAM18Q9Y3Q7 739 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 WNT6Q9Y6F9 365 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 CDH23Q9H251 3354 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 NAP1L6A6NFF2 107 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF879B4DU55 563 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 KCNAB3O43448 404 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 SIGLEC6O43699 453 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 NARSO43776 548 aaKnown RBP8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MAS1P04201 325 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 SELPP16109 830 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MAOBP27338 520 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 DPP4P27487 766 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 TNFRSF17Q02223 184 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 FGL1Q08830 312 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 UBXN2BQ14CS0 331 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MLC1Q15049 377 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 DUSP5Q16690 384 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ELFN2Q5R3F8 820 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 PWWP2BQ6NUJ5 590 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 FIGNL1Q6PIW4 674 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 MAMSTRQ6ZN01 415 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 ASPGQ86U10 573 aa8.88□□□□□ -0.99
PTPRA-202ENST00000318266 RANBP3LQ86VV4 465 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms