RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 DCUN1D3Q8IWE4 304 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 DCAF4L2Q8NA75 395 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OR52K2Q8NGK3 314 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 OR5M9Q8NGP3 310 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 KCTD4Q8WVF5 259 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 BADQ92934 168 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MAGED4Q96JG8 741 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CNDP1Q96KN2 507 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 TRIB3Q96RU7 358 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 C19orf43Q9BQ61 176 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 CLEC7AQ9BXN2 247 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 C20orf27Q9GZN8 174 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 DRC3Q9H069 523 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 EML4Q9HC35 981 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 IL1RAPQ9NPH3 570 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 PLCXD1Q9NUJ7 323 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 LHX3Q9UBR4 397 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MARCOQ9UEW3 520 aaPredicted RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 MIOXQ9UGB7 285 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 LNPEPQ9UIQ6 1025 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ICAM5Q9UMF0 924 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RPL26L1Q9UNX3 145 aaKnown RBP3.41□□□□□ -1.86
SMCO3-201ENST00000316048 TCF19Q9Y242 345 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 RNF115Q9Y4L5 304 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 TNFRSF18Q9Y5U5 241 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 ARL5AQ9Y689 179 aa3.41□□□□□ -1.86
SMCO3-201ENST00000316048 LTBP2Q14767 1821 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 FER1L5A0AVI2 2057 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 A0A1W2PQ67 120 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 CCL16O15467 120 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 GYG2O15488 501 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 MGRN1O60291 552 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SNAP91O60641 907 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SMIM24O75264 130 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 LYPLA1O75608 230 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SRP72O76094 671 aaKnown RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 IGSF6O95976 241 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 HPRP00739 348 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 GPR183P32249 361 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 TTPAP49638 278 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 PLK1P53350 603 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SH3BGRP55822 239 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 DNAJB13P59910 316 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 NAA20P61599 178 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ELF3P78545 371 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 BCL2L1Q07817 233 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 MRPL28Q13084 256 aaKnown RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 IHHQ14623 411 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 TEAD2Q15562 447 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SNCBQ16143 134 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF876PQ49A33 203 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ARMC12Q5T9G4 340 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 IL23RQ5VWK5 629 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 HIST2H2AA3Q6FI13 130 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 STEAP1BQ6NZ63 245 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 AFTPHQ6ULP2 937 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 TPGS1Q6ZTW0 290 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 GRAMD2AQ8IUY3 354 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 BBS7Q8IWZ6 715 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 OR4N5Q8IXE1 308 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 CMTM8Q8IZV2 173 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 CENPLQ8N0S6 344 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 STK40Q8N2I9 435 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 BCORP1Q8N888 145 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 C9orf106Q8NAJ2 232 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 FAM71CQ8NEG0 241 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 OR4K2Q8NGD2 314 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ANKRD49Q8WVL7 239 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 RAB7BQ96AH8 199 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 DNAJC1Q96KC8 554 aaKnown RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF300Q96RE9 604 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SORT1Q99523 831 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 TAS2R13Q9NYV9 303 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 C6orf203Q9P0P8 240 aaPredicted RBP3.4□□□□□ -1.86
SMCO3-201ENST00000316048 ERVK-18Q9QC07 812 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 CACNG5Q9UF02 275 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 STK38LQ9Y2H1 464 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 SLC6A5Q9Y345 797 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 OR51B4Q9Y5P0 310 aa3.4□□□□□ -1.86
SMCO3-201ENST00000316048 COL4A6Q14031 1691 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 GOLGA8QA0A0J9YX86 632 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 GOLGA8OA6NCC3 632 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 OR51F1A6NGY5 319 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 NKX6-3A6NJ46 265 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 TRPC5OSA6NMA1 111 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 HIDE1A8MVS5 230 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SPECC1L-ADORA2AF8WAN1 911 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 GOLGA8NF8WBI6 632 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 H3BMH7 237 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 CCL22O00626 93 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 SLC9A3R1O14745 358 aaPredicted RBP3.4□□□□□ -1.87
SMCO3-201ENST00000316048 HDAC3O15379 428 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 KIAA0513O60268 411 aa3.4□□□□□ -1.87
SMCO3-201ENST00000316048 KLHL41O60662 606 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms