RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GPIP06744 558 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 CD247P20963 164 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 IL32P24001 234 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 NR1H2P55055 460 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 COPZ1P61923 177 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 RBBP4Q09028 425 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 SF3A3Q12874 501 aaKnown RBP eCLIP12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 NFYCQ13952 458 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 DUSP7Q16829 419 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 TRMT5Q32P41 509 aaKnown RBP12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 TSPO2Q5TGU0 170 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 ADAM5Q6NVV9 412 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 CALHM3Q86XJ0 350 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 HSD17B8Q92506 261 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 MUS81Q96NY9 551 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 SF3B5Q9BWJ5 86 aaKnown RBP12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 SLC9A8Q9Y2E8 581 aa12.85□□□□□ -0.35
PPP1CA-201ENST00000312989 OR5H1A6NKK0 313 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 OPN1SWP03999 348 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 PNMTP11086 282 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 SLC6A2P23975 617 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 ARFIP2P53365 341 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 GABRA6Q16445 453 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NRF1Q16656 503 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 RABL3Q5HYI8 236 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 COQ5Q5HYK3 327 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 TIMM23BQ5SRD1 257 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NANOGP8Q6NSW7 305 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 C20orf204Q6ZNR8 217 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 LINGO2Q7L985 606 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 ZNF100Q8IYN0 542 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 C11orf65Q8NCR3 313 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 MFSD8Q8NHS3 518 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NEUROG1Q92886 237 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 TAAR8Q969N4 342 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 BOD1Q96IK1 185 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 ARMC7Q9H6L4 198 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 NANOGQ9H9S0 305 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 KLHL14Q9P2G3 628 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 TESQ9UGI8 421 aaKnown RBP12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 USP22Q9UPT9 525 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 SLC25A15Q9Y619 301 aa12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
PPP1CA-201ENST00000312989 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 RAD51DO75771 328 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 LGI1O95970 557 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 DANCRP0C864 163 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 PAX1P15863 534 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 GGT1P19440 569 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 PCGF2P35227 344 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 LTBQ06643 244 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 LGALS3BPQ08380 585 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 REP15Q6BDI9 236 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 CASP12Q6UXS9 341 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 LINC00114Q6XXX2 140 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 KRT73Q86Y46 540 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 P3H2Q8IVL5 708 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF611Q8N823 705 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 WDR31Q8NA23 367 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 OR10A6Q8NH74 314 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 SLC38A4Q969I6 547 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 SPATA5L1Q9BVQ7 753 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 PIF1Q9H611 641 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 TAS2R16Q9NYV7 291 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 EDARQ9UNE0 448 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 ANGPT4Q9Y264 503 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 ACANP16112 2415 aa12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 ANK3Q12955 4377 aaKnown RBP12.83□□□□□ -0.36
PPP1CA-201ENST00000312989 A0A087WUJ7 227 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 M0QX08 132 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 M0R3H8 397 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 HS3ST1O14792 307 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 ZNF432O94892 652 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 TROVE2P10155 538 aaKnown RBP eCLIP12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 RPS5P46782 204 aaKnown RBP12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 BSPH1Q075Z2 132 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 FAPQ12884 760 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 PPA1Q15181 289 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 CYP51A1Q16850 503 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 ALG10BQ5I7T1 473 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 FAM91A1Q658Y4 838 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 WDR88Q6ZMY6 472 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 CCDC80Q76M96 950 aa12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 RBM45Q8IUH3 476 aaKnown RBP12.82□□□□□ -0.36
PPP1CA-201ENST00000312989 ARMC8Q8IUR7 673 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms