RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SMIM4Q8WVI0 70 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SPRYD4Q8WW59 207 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 S100PBPQ96BU1 408 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 YIPF6Q96EC8 236 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PCNX1Q96RV3 2341 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GABRR3A8MPY1 467 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 H3BNC9 293 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 BOLA2-SMG1P6H3BVE0 249 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 FGF18O76093 207 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 FBLP22087 321 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC6A12P48065 614 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 EVX1P49640 407 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 HPSE2Q8WWQ2 592 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 DDX31Q9H8H2 851 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 LIN7BQ9HAP6 207 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 INIPQ9NRY2 104 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PCDHGA6Q9Y5G7 932 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 GSTP1P09211 210 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 HOXB2P14652 356 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PTH2RP49190 550 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 SLC26A5P58743 744 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 DCLRE1CQ96SD1 692 aaKnown RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PLK3Q9H4B4 646 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 CUEDC1Q9NWM3 386 aaPredicted RBP8.22□□□□□ -1.09
COL6A5-202ENST00000312481 ACTL7AQ9Y615 435 aa8.22□□□□□ -1.09
COL6A5-202ENST00000312481 PCNX2A6NKB5 2137 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 A0A087WZY1 265 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 DDAH2O95865 285 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 FABP1P07148 127 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 GPLD1P80108 840 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 CHRNEQ04844 493 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ST8SIA1Q92185 356 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 MARC2Q969Z3 335 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.09
COL6A5-202ENST00000312481 BARD1Q99728 777 aaKnown RBP8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ADAM19Q9H013 955 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.09
COL6A5-202ENST00000312481 SHANK1Q9Y566 2161 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 FAM72CH0Y354 149 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ARPC5O15511 151 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 SRMP19623 302 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 BDKRB2P30411 391 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 HMGA2P52926 109 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 CDK3Q00526 305 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 LRIT3Q3SXY7 679 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 FAM72AQ5TYM5 149 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 FAM72DQ6L9T8 149 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 SLCO4C1Q6ZQN7 724 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 FAM72BQ86X60 149 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 TAS2R5Q9NYW4 299 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 DKKL1Q9UK85 242 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 LHX6Q9UPM6 363 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ADAM18Q9Y3Q7 739 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 NCKAP5O14513 1909 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 OPN1SWP03999 348 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 HOXC4P09017 264 aaPredicted RBP8.21□□□□□ -1.09
COL6A5-202ENST00000312481 F2RL1P55085 397 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 IHHQ14623 411 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.09
COL6A5-202ENST00000312481 OPN5Q6U736 354 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 Q6ZVL8 140 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 WDR34Q96EX3 536 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 ZNF286AQ9HBT8 521 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 PRSS16Q9NQE7 514 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 B3GAT1Q9P2W7 334 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 RASD1Q9Y272 281 aa8.21□□□□□ -1.09
COL6A5-202ENST00000312481 CACNA1BQ00975 2339 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 C13orf42A0A1B0GVH6 325 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 RFXAPO00287 272 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PDGFAP04085 211 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 TGM1P22735 817 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 C1orf94Q6P1W5 598 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CRTC1Q6UUV9 634 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 KMT5CQ86Y97 462 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 IQCF2Q8IXL9 164 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 OR9A2Q8NGT5 310 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 SYNPRQ8TBG9 265 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 POC1BQ8TC44 478 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 LPAR4Q99677 370 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 SLC17A9Q9BYT1 436 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 C14orf119Q9NWQ9 140 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CHRNA9Q9UGM1 479 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF749O43361 778 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 GLCEO94923 617 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 ADPRMQ3LIE5 342 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CTSL3PQ5NE16 218 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM236Q5W0B7 351 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM225Q6GV28 225 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PLBD1Q6P4A8 553 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CCDC190Q86UF4 302 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 CALHM3Q86XJ0 350 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 FBXO27Q8NI29 283 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PGAM5Q96HS1 289 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 C20orf85Q9H1P6 137 aa8.21□□□□□ -1.1
COL6A5-202ENST00000312481 EXOSC3Q9NQT5 275 aaKnown RBP8.21□□□□□ -1.1
COL6A5-202ENST00000312481 UBE2J1Q9Y385 318 aaPredicted RBP8.21□□□□□ -1.1
COL6A5-202ENST00000312481 PHF3Q92576 2039 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms