RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 GFI1Q99684 422 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 OR51J1Q9H342 316 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 MKKSQ9NPJ1 570 aaPredicted RBP23.21■■□□□ 1.31
HOXB3-201ENST00000311626 ICAM5Q9UMF0 924 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 BAIAP2Q9UQB8 552 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 TNFP01375 233 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 OR2T7P0C7T2 308 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 AKT2P31751 481 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 PPM1FP49593 454 aaPredicted RBP23.21■■□□□ 1.31
HOXB3-201ENST00000311626 LINC00114Q6XXX2 140 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 C10orf53Q8N6V4 93 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 OR8H1Q8NGG4 311 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 OR2T27Q8NH04 317 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 KLHDC3Q9BQ90 382 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.21■■□□□ 1.31
HOXB3-201ENST00000311626 NPFFR2Q9Y5X5 522 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 CACNA1CQ13936 2221 aa23.21■■□□□ 1.31
HOXB3-201ENST00000311626 B4DGG1 531 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 TNFRSF10CO14798 259 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 SPI1P17947 270 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 STOMP27105 288 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 NANOS3P60323 173 aaKnown RBP23.2■■□□□ 1.3
HOXB3-201ENST00000311626 OR7G1Q8NGA0 311 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 SLC2A12Q8TD20 617 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 CDCP1Q9H5V8 836 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 FBXL21Q9UKT6 434 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 CCR4P51679 360 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 ST3GAL2Q16842 350 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 HSD17B12Q53GQ0 312 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 LSMEM1Q8N8F7 131 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 ZNF431Q8TF32 576 aaPredicted RBP23.2■■□□□ 1.3
HOXB3-201ENST00000311626 PCNPQ8WW12 178 aaKnown RBP23.2■■□□□ 1.3
HOXB3-201ENST00000311626 ASB12Q8WXK4 309 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 Q96M85 177 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 TSPAN10Q9H1Z9 355 aaPredicted RBP23.2■■□□□ 1.3
HOXB3-201ENST00000311626 ZFP64Q9NPA5 681 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 ANKRD10Q9NXR5 420 aa23.2■■□□□ 1.3
HOXB3-201ENST00000311626 OIP5O43482 229 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 UBL3O95164 117 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 CT45A8P0DMV1 189 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 CT45A9P0DMV2 189 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 RBM34P42696 430 aaKnown RBP23.19■■□□□ 1.3
HOXB3-201ENST00000311626 HHEXQ03014 270 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 POU4F2Q12837 409 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 FGFBP1Q14512 234 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 ZSWIM7Q19AV6 140 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 CT45A2Q5DJT8 189 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 TMEM255AQ5JRV8 349 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 LINGO2Q7L985 606 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 LMF2Q9BU23 707 aaKnown RBP23.19■■□□□ 1.3
HOXB3-201ENST00000311626 TRAV1-2A0A0B4J238 106 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 A0A1B0GTH9 108 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 TRABD2BA6NFA1 517 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 H7C1C5 153 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 UCHL1P09936 223 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 POU3F3P20264 500 aaPredicted RBP23.19■■□□□ 1.3
HOXB3-201ENST00000311626 AQP2P41181 271 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 LCN6P62502 163 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 CDONQ4KMG0 1287 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 GRAMD2AQ8IUY3 354 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 MCATQ8IVS2 390 aaKnown RBP23.19■■□□□ 1.3
HOXB3-201ENST00000311626 C16orf52Q8NHV5 167 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 HYLS1Q96M11 299 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 PRDM9Q9NQV7 894 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 PIAS3Q9Y6X2 628 aa23.19■■□□□ 1.3
HOXB3-201ENST00000311626 EML5Q05BV3 1969 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 GMDSO60547 372 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 RPS27P42677 84 aaKnown RBP23.18■■□□□ 1.3
HOXB3-201ENST00000311626 DIO1P49895 249 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 EIF2B5Q13144 721 aaKnown RBP23.18■■□□□ 1.3
HOXB3-201ENST00000311626 LEG1Q6P5S2 330 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 BCORP1Q8N888 145 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 HAVCR2Q8TDQ0 301 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 GPBAR1Q8TDU6 330 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 GIMAP1Q8WWP7 306 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 ZNF524Q96C55 264 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 POLE3Q9NRF9 147 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 OR5K3A6NET4 321 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 FOXS1O43638 330 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 IFNA16P05015 189 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 CDKN2AP42771 156 aaKnown RBP23.18■■□□□ 1.3
HOXB3-201ENST00000311626 OOSP2Q86WS3 158 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 TEX19Q8NA77 164 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 NRIP3Q9NQ35 241 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 BRWD1Q9NSI6 2320 aa23.18■■□□□ 1.3
HOXB3-201ENST00000311626 SERPINA3P01011 423 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 GABRG2P18507 467 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 SRMP19623 302 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 MMP15P51511 669 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 SNTB2Q13425 540 aaKnown RBP23.17■■□□□ 1.3
HOXB3-201ENST00000311626 ARMC6Q6NXE6 501 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 OR14A16Q8NHC5 309 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 NUBP2Q9Y5Y2 271 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 C7orf66A4D0T2 115 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 ARL6IP5O75915 188 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 F13BP05160 661 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 SSTR2P30874 369 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 GDNFP39905 211 aa23.17■■□□□ 1.3
HOXB3-201ENST00000311626 MAZP56270 477 aaKnown RBP23.17■■□□□ 1.3
HOXB3-201ENST00000311626 ODF4Q2M2E3 257 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms