RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SBK2P0C263 348 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CCL5P13501 91 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 FKBP2P26885 142 aaKnown RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 TXNRD3NBQ6F5E7 133 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 OR9Q2Q8NGE9 314 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF566Q969W8 418 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 KIRREL1Q96J84 757 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 KCNJ15Q99712 375 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ARV1Q9H2C2 271 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF395Q9H8N7 513 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ELOVL3Q9HB03 270 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 EXOSC3Q9NQT5 275 aaKnown RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ACSM1Q08AH1 577 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 RPS26P11Q5JNZ5 115 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 HENMT1Q5T8I9 393 aaKnown RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 OLAHQ9NV23 265 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 TMEM269A0A1B0GVZ9 245 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 NSA2O95478 260 aaKnown RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 KIR2DL3P43628 341 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 GIPRP48546 466 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 NFATC4Q14934 902 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF705AQ6ZN79 300 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 BPIFB2Q8N4F0 458 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 FAM213BQ8TBF2 198 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CDS1Q92903 461 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 TCTN2Q96GX1 697 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 OR14J1Q9UGF5 321 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 PUS1Q9Y606 427 aaKnown RBP eCLIP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 NKX6-3A6NJ46 265 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 DVL1O14640 695 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 OR2T7P0C7T2 308 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 DVL1P1P54792 670 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 BTN1A1Q13410 526 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CBARPQ8N350 705 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 DTX3Q8N9I9 347 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CHRDL1Q9BU40 450 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 YTHDF2Q9Y5A9 579 aaKnown RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ADAM12O43184 909 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 HPNP05981 417 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 DTWD1Q8N5C7 304 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 PARP16Q8N5Y8 322 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 COPS3Q9UNS2 423 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 KLK4Q9Y5K2 254 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 SLC11A1P49279 550 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 IGFN1Q86VF2 1251 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 BABAM2Q9NXR7 383 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 TUSC2O75896 110 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CLEC3BP05452 202 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ACRP10323 421 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CPNE4Q96A23 557 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 NRIP3Q9NQ35 241 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 DECR2Q9NUI1 292 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 GDE1Q9NZC3 331 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ZFAND5O76080 213 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 CLDN1O95832 211 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 TM4SF1P30408 202 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 TP53I3Q53FA7 332 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF597Q96LX8 424 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 RYDENQ9NUL5 291 aaKnown RBP14.47□□□□□ -0.09
HCFC1-201ENST00000310441 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
HCFC1-201ENST00000310441 AHRP35869 848 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 RNF175Q8N4F7 328 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 NDFIP1Q9BT67 221 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SLC16A6O15403 523 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SPINT2O43291 252 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 TAGLN2P37802 199 aaKnown RBP14.46□□□□□ -0.09
HCFC1-201ENST00000310441 TGM4P49221 684 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SLC35A1P78382 337 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 NTMT1Q9BV86 223 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 GNG12Q9UBI6 72 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 PMS2P2O95744 297 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 ACPPP15309 386 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 PDE7AQ13946 482 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 RNF151Q2KHN1 245 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 LSMEM2Q8N112 164 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 CISD2Q8N5K1 135 aaKnown RBP14.46□□□□□ -0.09
HCFC1-201ENST00000310441 CLDN22Q8N7P3 220 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 UFSP2Q9NUQ7 469 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 NECAP2Q9NVZ3 263 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 CACNA1DQ01668 2161 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 ITGB4P16144 1822 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 MTCP1P56278 107 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SHEQ5VZ18 495 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 COX15Q7KZN9 410 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SCLYQ96I15 445 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 ABHD6Q9BV23 337 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SGPP1Q9BX95 441 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.46□□□□□ -0.09
HCFC1-201ENST00000310441 LINC01599Q8WXQ3 324 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 RTP4Q96DX8 246 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 TMPRSS5Q9H3S3 457 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 PRDM9Q9NQV7 894 aa14.46□□□□□ -0.09
HCFC1-201ENST00000310441 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 GPR32O75388 356 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 ARAFP10398 606 aa14.46□□□□□ -0.1
HCFC1-201ENST00000310441 HNRNPA2B1P22626 353 aaKnown RBP14.46□□□□□ -0.1
HCFC1-201ENST00000310441 EIF1P41567 113 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms